PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7S07

Crystal structure of epstein-barr virus glycoprotein gh/gl/gp42-peptide in complex with human neutralizing antibodies 769b10 and 769c2

PDB DOI: 10.2210/pdb7s07/pdb

Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Organism(s): Homo Sapiens , Human Gammaherpesvirus 4

Deposited: 2021-08-30
Deposition Author(s): Chen, W.-H. , Cohen, J.I. , Joyce, M.G. , Kanekiyo, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.29 Å

7s07
Literature

Crystal structure of epstein-barr virus glycoprotein gh/gl/gp42-peptide in complex with human neutralizing antibodies 769b10 and 769c2

Chen, W.-H. , Cohen, J.I. , Joyce, M.G. , Kanekiyo, M.

Primary Citation of Related Structures: 7S07


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein H A 657 Homo Sapiens , Human Gammaherpesvirus 4 ASLSEVKLHLDIEGHASHYTIPWTELMAKVPGLSPEALWREANVTEDLASMLNRYKLIYKTSGTLGIALAEPVDIPAVSEGSMQVDASKVHPGVISGLNSPACMLSAPLEKQLFYYIGTMLPNTRPHSYVFYQLRCHLSYVALSINGDKFQYTGAMTSKFLMGTYKRVTEKGDEHVLSLVFGKTKDLPDLRGPFSYPSLTSAQSGDYSLVIVTTFVHYANFHNYFVPNLKDMFSRAVTMTAASYARYVLQKLVLLEMKGGCREPELDTETLTTMFEVSVAFFKVGHAVGETGNGCVDLRWLAKSFFELTVLKDIIGICYGATVKGMQSYGLERLAAMLMATVKMEELGHLTTEKQEYALRLATVGYPKAGVYSGLIGGATSVLLSAYNRHPLFQPLHTVMRETLFIGSHVVLRELRLNVTTQGPNLALYQLLSTALCSALEIGEVLRGLALGTESGLFSPCYLSLRFDLTRDKLLSMAPQEATLDQAAVSNAVDGFLGRLSLEREDRDAWHLPAYKCVDRLDKVLMIIPLINVTFIISSDREVRGSALYEASTTYLSSSLFLSPVIMNKCSQGAVAGEPRQIPKIQNFTRTQKSCIFCGFALLSYDEKEGLETTTYITSQEVQNSILSSNYFDFDNLHVHYLLLTTNGTVMEIAGLY
Envelope glycoprotein L B 98 Homo Sapiens , Human Gammaherpesvirus 4 PCCHVTQLAAQHLLALENISDIYLVSNQTCDGFSLASLNSPKNGSNQLVISRCANGLNVVSFFISILKRSSSALTGHLRELLTTLETLYGSFSVEDLF
Soluble gp42 C 33 Homo Sapiens , Human Gammaherpesvirus 4 KPNVEVWPVDPPPPVNFNKTAEQEYGDKEVKLP
769C2 Fab Heavy chain X 225 Homo Sapiens , Human Gammaherpesvirus 4 EVQLVESGGGLVKPGGSLRLSCAASGFTFSTYAMDWVRQAPGKGLEWVSLISSRSSNIYYSDSVKGNFTISRDNAKNSLFLQMNSLRAEDTAVYYCAREAGGFHSHFDMWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
769C2 Fab Light chain Y 215 Homo Sapiens , Human Gammaherpesvirus 4 QSVLTQPASVSGSLGQSVTISCTGTSSDVGGYDYVSWYQQHPGKNPKLMIFEVNNRPSGVSTRFSGSKSGNTASLTISGLQAEDEADYYCNSYSTTTTWVFGGGTSLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
769B10 Fab heavy chain H 234 Homo Sapiens , Human Gammaherpesvirus 4 EVQLVESGGGIVQPGGSLRVSCAASGFSLSDHYMDWVRQAPGRGLEWVGRSRNKENSFTTEFAASVRRRFTISRDDSNSLLHLQMNNLKSEDTAVYFCARVGYYDLWSGYSGNWYIDVWGRGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGVLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
769B10 Fab light chain L 214 Homo Sapiens , Human Gammaherpesvirus 4 DIQMTQSPSSLSASLGDSVTITCRASQTMSNFLNWYQQKPGKAPKFLIYAASRLQSGVPSRFSGSGSGTQFTLTISNLQPEDFATYYCQQSFLFPYTFGGGTKVEVERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-08-30
Deposition Author(s): Chen, W.-H. , Cohen, J.I. , Joyce, M.G. , Kanekiyo, M.