7RKM
Structure of cx3cl1-us28-gi-scfv16 in c-state
PDB DOI: 10.2210/pdb7rkm/pdb
Classification: MEMBRANE PROTEIN Organism(s): Homo Sapiens , Human Betaherpesvirus 5 , Mus Musculus
Deposited: 2021-07-22 Deposition Author(s): Garcia, K.C. , Jude, K.M. , Qu, Q. , Skiniotis, G. , Tsutsumi, N.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.5 Å
Structure of cx3cl1-us28-gi-scfv16 in c-state
Garcia, K.C. , Jude, K.M. , Qu, Q. , Skiniotis, G. , Tsutsumi, N.
Primary Citation of Related Structures: 7RKM
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Guanine nucleotide-binding protein G(i) subunit alpha-1 | A | 353 | Homo Sapiens , Human Betaherpesvirus 5 , Mus Musculus | GCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAGYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF |
| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | B | 345 | Homo Sapiens , Human Betaherpesvirus 5 , Mus Musculus | GPGSSGSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | C | 67 | Homo Sapiens , Human Betaherpesvirus 5 , Mus Musculus | ASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFC |
| Antibody fragment scFv16 | D | 256 | Homo Sapiens , Human Betaherpesvirus 5 , Mus Musculus | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQ |
| Fractalkine | L | 91 | Homo Sapiens , Human Betaherpesvirus 5 , Mus Musculus | QHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGSGSGSAAALEVLFQ |
| G-protein coupled receptor homolog US28 | R | 362 | Homo Sapiens , Human Betaherpesvirus 5 , Mus Musculus | DYKDDDDAMTPTTTTAELTTEFDYDEDATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDHNSLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFRQRLFSRDVSWYHSMSFSRRSSPSRRETSSDTLSDEVCRVSQIIP |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-07-22 Deposition Author(s): Garcia, K.C. , Jude, K.M. , Qu, Q. , Skiniotis, G. , Tsutsumi, N.