PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7RK1

Crystal structure of the human astrovirus serotype 8 capsid spike in complex with scfv 3e8, an astrovirus-neutralizing antibody, at 2.05-a resolution

PDB DOI: 10.2210/pdb7rk1/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Astrovirus-8 , Mus Musculus

Deposited: 2021-07-21
Deposition Author(s): Dubois, R.M. , Meyer, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.05 Å

Literature

Crystal structure of the human astrovirus serotype 8 capsid spike in complex with scfv 3e8, an astrovirus-neutralizing antibody, at 2.05-a resolution

Dubois, R.M. , Meyer, L.

Primary Citation of Related Structures: 7RK1


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid polyprotein VP70 A 230 Human Astrovirus-8 , Mus Musculus MGGEQFRVLLTVGPPMAPNTANSQNWVNKTIVPPENQYTVKIGIDLEHYTTMQGFTPVESVSWYTADFQPSDEPSPIPGLYARVNNTKKADVYGVQQFKSSHTNNRHQITSVFLVRVTTSFQVINYTSYFIRGAESGSNVSNLKIRDQTYHTPLQFTQGKWYLLTSTVMHDGPTSSGWVWMNQELTNNIAYRVDPGMMYLITPPPAASQLYFELHTVLPQAAAELALVPR
Capsid polyprotein VP70 B 230 Human Astrovirus-8 , Mus Musculus MGGEQFRVLLTVGPPMAPNTANSQNWVNKTIVPPENQYTVKIGIDLEHYTTMQGFTPVESVSWYTADFQPSDEPSPIPGLYARVNNTKKADVYGVQQFKSSHTNNRHQITSVFLVRVTTSFQVINYTSYFIRGAESGSNVSNLKIRDQTYHTPLQFTQGKWYLLTSTVMHDGPTSSGWVWMNQELTNNIAYRVDPGMMYLITPPPAASQLYFELHTVLPQAAAELALVPR
scFv 3E8 C 248 Human Astrovirus-8 , Mus Musculus DVQLQESGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFPGNKLEWMGYISYDGSNNYNPSLKNRISITRDTSKNQFFLKLNSVTTEDTATYYCATFYDGYDYWGQGTTLTVSSGGSGGGGSGGGGSGGGGSDIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDYTLTISSVQAEDLALYYCQQHYSTPFTFGSGTKLEIKRASLVPR
scFv 3E8 D 248 Human Astrovirus-8 , Mus Musculus DVQLQESGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFPGNKLEWMGYISYDGSNNYNPSLKNRISITRDTSKNQFFLKLNSVTTEDTATYYCATFYDGYDYWGQGTTLTVSSGGSGGGGSGGGGSGGGGSDIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDYTLTISSVQAEDLALYYCQQHYSTPFTFGSGTKLEIKRASLVPR
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-07-21
Deposition Author(s): Dubois, R.M. , Meyer, L.