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7RDV
Tfh tcr bound to mhc class ii iad presenting aggrecan epitope
PDB DOI: 10.2210/pdb7rdv/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Mus Musculus
Deposited: 2021-07-11 Deposition Author(s): Lim, J.J. , Reid, H. , Rossjohn, J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.90007 Å
Tfh tcr bound to mhc class ii iad presenting aggrecan epitope
Lim, J.J. , Reid, H. , Rossjohn, J.
Primary Citation of Related Structures: 7RDV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| H-2 class II histocompatibility antigen, A-D alpha chain | A | 181 | Homo Sapiens , Mus Musculus | EADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKRSNFTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWTSG |
| H-2 class II histocompatibility antigen, A-D beta chain | B | 186 | Homo Sapiens , Mus Musculus | ERHFVVQFKGECYYTNGTQRIRLVTRYIYNREEYVRYDSDVGEYRAVTELGRPDAEYWNSQPEILERTRAEVDTACRHNYEGPETSTSLRRLEQPNVAISLSRTEALNHHNTLVCSVTDFYPAKIKVRWFRNGQEETVGVSSTQLIRNGDWTFQVLVMLEMTPHQGEVYTCHVEHPSLKSPITVEW |
| TFH TCR alpha chain | C | 205 | Homo Sapiens , Mus Musculus | EQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAASDDNNNRIFFGDGTQLVVKPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS |
| TFH TCR beta chain | D | 240 | Homo Sapiens , Mus Musculus | AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGGQSNERLFFGHGTKLSVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
| Aggrecan core peptide | H | 12 | Homo Sapiens , Mus Musculus | EGRVRVNSAYQS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2021-07-11 Deposition Author(s): Lim, J.J. , Reid, H. , Rossjohn, J.