PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7RDH

Crystal structure of the de novo designed binding protein h3mb in complex with the 1968 influenza a virus hemagglutinin

PDB DOI: 10.2210/pdb7rdh/pdb

Classification: VIRAL PROTEIN/DE NOVO PROTEIN
Organism(s): Adineta Vaga , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110)

Deposited: 2021-07-09
Deposition Author(s): Kadam, R.U. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.75 Å

7rdh
Literature

Crystal structure of the de novo designed binding protein h3mb in complex with the 1968 influenza a virus hemagglutinin

Kadam, R.U. , Wilson, I.A.

Primary Citation of Related Structures: 7RDH


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin HA1 chain A 323 Adineta Vaga , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) ADPGATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQTR
Hemagglutinin HA1 chain C 323 Adineta Vaga , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) ADPGATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQTR
Hemagglutinin HA1 chain E 323 Adineta Vaga , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) ADPGATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQTR
Hemagglutinin HA2 chain B 239 Adineta Vaga , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTGRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQIKGVSGGGGLNDIFEAQKIEWHERLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
Hemagglutinin HA2 chain D 239 Adineta Vaga , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTGRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQIKGVSGGGGLNDIFEAQKIEWHERLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
Hemagglutinin HA2 chain F 239 Adineta Vaga , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTGRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQIKGVSGGGGLNDIFEAQKIEWHERLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
De novo designed protein H3mb G 77 Adineta Vaga , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) MSHHHHHHHHSENLYFQSGGSQHEKFLEWMLRKIEEAIKRGNKISAEFLINLAKNFIHVLGDDEIRRRLERLERQLH
De novo designed protein H3mb H 77 Adineta Vaga , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) MSHHHHHHHHSENLYFQSGGSQHEKFLEWMLRKIEEAIKRGNKISAEFLINLAKNFIHVLGDDEIRRRLERLERQLH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-07-09
Deposition Author(s): Kadam, R.U. , Wilson, I.A.