7R8J
Crystal structure of pseudooceanicola lipolyticus argonaute bound to 5' p guide dna in the presence of mg2+
PDB DOI: 10.2210/pdb7r8j/pdb
Classification: HYDROLASE/DNA Organism(s): Pseudooceanicola Lipolyticus , Synthetic Construct
Deposited: 2021-06-26 Deposition Author(s): Murakami, K.S. , Shin, Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.7 Å
Crystal structure of pseudooceanicola lipolyticus argonaute bound to 5' p guide dna in the presence of mg2+
Primary Citation of Related Structures: 7R8J
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Argonaute | A | 789 | Pseudooceanicola Lipolyticus , Synthetic Construct | MTLETTLFPLEGTGACGASYQLYAVKGLSGLDETEYHKNVNLLVRRLSFSMKAPFVALSRDGEQFIAVPNYVTEFPVDHRVVRAMVKLVPTGEPLNLRFDAADDEYDGLRLRYLDFVLQQPLFANHHLWQPGSGQPFFHKKPLKRLDDVDLYDGVSVRAAKHPEGGFGIVCDARSKFITHTPIGARADRKRLGKLINRSCLYKMGDHWYQFRIDAVSDWKVGEPSLFEGNVPISLAQQLVRTAGNAAPKSIIDLDPEGGALEYFTSTNERRMAPAELCFLIEDTHGRRAAKLQRQTILSPSERRARVNGFIRRYLSELNIGGAKLSAGARAHAFFTETHMPPALSFGNGTVLAPDTSKDRFQAMQEYSSMRRTMMLDKKVGFFHQDVFPPQTLLLPESVKKSWGPAFASDFVGTVQELYPAGGYRPEIIEYRDKAYGGGVPGQMKALLEVAERGEIKSGDVLVMLHRINGAPRAQDKLAAMVCNEFEKRFGKRVQVIHSDSPGRGYKRIFKNDKPTYVQQRGRGVNIKGYLKGAALNKVCLGNSRWPFVLRDPLNADVTIGIDVKNNMAVFTMVAEGGRIVRVQRSRSRQREQLLESQVTQVITEMLSKELPEIKKQVQRVVIHRDGRAWPAEIAGARKTFADMAESGLIAVDADVSVFEVLKSSPAPLRLFSFEEPTQENPKGVINPVLGSWLKLSENDGYICTTGAPLLLQGTADPLHVRKAFGPMAIEDALKDVFDLSCLTWPKPDSCMRLPLTIKLCDIALFDDAAEYDVDVVRFADGNTGEASA |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*TP*TP*AP*CP*TP*GP*CP*AP*CP*AP*GP*GP*TP*GP*AP*CP*GP*A)-3') | t | 18 | NA | TTACTGCACAGGTGACGA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2021-06-26 Deposition Author(s): Murakami, K.S. , Shin, Y.