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FASTA Sequence PDB Format mmCIF Format
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7R81

Structure of the translating neurospora crassa ribosome arrested by cycloheximide

PDB DOI: 10.2210/pdb7r81/pdb

Classification: TRANSLATION
Organism(s): Neurospora Crassa

Deposited: 2021-06-25
Deposition Author(s): Becker, T. , Bell-Pedersen, D. , Sachs, M.S. , Shen, L. , Su, Z. , Wu, C. , Yang, K. , Zhang, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

7r81
Literature

Structure of the translating neurospora crassa ribosome arrested by cycloheximide

Becker, T. , Bell-Pedersen, D. , Sachs, M.S. , Shen, L. , Su, Z. , Wu, C. , Yang, K. , Zhang, J.

Primary Citation of Related Structures: 7R81


Proteins
Molecule Chains Sequence Length Organism Sequence
Ribosomal protein L26 A1 136 Neurospora Crassa MVKVNNSVSSSRRKARKAHFSAPSSVRRNIMSAPLSKELREKYNVRSIPIRKDDEVTIVRGSNKDKEGKVTSVYRLKYVIHVERVTRDKATGASVPVGIHPSNVVITKLKLDKDREAILERIKRGRELAKPTKVSA
40S ribosomal protein S29 E2 56 Neurospora Crassa MSHESVWNSRPRTYGKGSRSCRVCTHSAGLIRKYGLNICRQCFREKANDIGFTKHR
60s ribosomal protein F1 122 Neurospora Crassa MSSKKPTGKTQRSAIADVVAREYTIHMHKRMHGVTFKKRAPRAIKEIKEFAYKAMGTTDVRIDPQLNKKVWEQGVKGVAYRLRVRISRRRNDEEGAKEKLYSYVQAVNVKNPKGLHTVVVEE
40S ribosomal protein S30 F2 63 Neurospora Crassa MGKVHGSLARAGKVKSQTPKVEPQEKPKTPKGRAHKREIYTRRFVNVVTGPGGKRKMNANPSA
60S ribosomal protein L32 G1 131 Neurospora Crassa MVAAKKHVPIVKKRSKGFMRHQSDRFMRVDSAWRKPKGIDNRVRRRFRGTLAMPSIGYGSNKKTRHMMPSGHKAFLVSNVKDVELLLMHNKTYAAEIAHNVSSRKRIEIIARAKQLSVKVTNAKAKVTTEV
Ubiquitin-40S ribosomal protein S27a G2 154 Neurospora Crassa MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKRKKTKLAVLKYYKVDSDGKIERLRRECPNETCGAGVFMAAMQDRQYCGRCHLTYVFEKSS
60S ribosomal protein L33 H1 109 Neurospora Crassa MPTEAGHRLYVKGRHLSYQRGRHTTHPKTSLIKIEGVDDTAAANFYLGKRVAYVYRGQKEVRGTKIRVIWGKVTRPHGNSGVVRAKFAAPLPSRSFGASVRIMLYPSSI
Guanine nucleotide-binding protein subunit beta-like protein H2 316 Neurospora Crassa MAEQLILKGTLEGHNGWVTSLATSLENPNMLLSGSRDKSLIIWNLTRDETSYGYPKRRLHGHSHIVSDCVISSDGAYALSASWDKTLRLWELSTGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKFTITEKGHTEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINAVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEIHALVFSPNRYWLCAATSSSIIIFDLEKKSKVDELKPEFQNIGKKSREPECVSLAWSADGQTLFAGYTDNIIRAWGVMSRA
60S ribosomal protein L34 I1 117 Neurospora Crassa MASSRVTYRRRNPYNTTSNKTRIVKTPGGQLRVLHIKKRGTAPKCGDCGIKLPGVPALRPREYAQLSKPKKTVQRAYGGSRCGNCVRDRVVRAFLIEEQKIVKKVLKEQSQAEKSKK
40S ribosomal protein S7 I2 202 Neurospora Crassa MSAPQLNKIAANSPSRQNPSELETAVAGALYDLESNTADLKAALRPLQFVSAREIEVGHGKKAIVIFVPVPSLQGFHRVQQRLTRELEKKFSDRHVLIVASRRILPRPKRSSRSRNTLKQKRPRSRTLTAVHDAILTDLVYPVEIVGKRLRVKEDGSKTLKVILDEKERGSVDYRLDTYSAVYRRLTGKNVLFEFPLVSAEY
60S ribosomal protein L35 J1 125 Neurospora Crassa MSSGKVKAGALWSKNKDELTKQLGELKTELGQLRIQKIVSSGTKLNKIHDLRKSIARVLTIINAKQRAQLRLFYKNKKYLPLDLRAKQTRAIRRRLSKEDASRVLEKTKKRTTHFPLRKFAVKAA
40S ribosomal protein S25 A2 97 Neurospora Crassa MAPAASGAKKQKKKWSKGKVKDKAQHAVILDKSTSDKLYKDVQSYRLVTVATLVDRLKINGSLARRCLKDLEEKGQIKQVVGHSKMKIYTRAIGADE
40S ribosomal protein S8 J2 202 Neurospora Crassa MGISRDSRHKRSHTGAKRAYYRKKRAFEAGRQPANTRIGAKRIHTVRTRGGNHKYRALRLDSGNFAWASEGCTRKTRVIVVAYHPSNNELVRTNTLTKSAVVQIDAAPFRQWYEAHYGQPLGRRRQQKQGQVVEEVKKSKSVEKKQAERFAAAGKVDPALEKQFEAGRLYAVISSRPGQSGRCDGYILEGEELAFYQRKLHK
60S ribosomal protein L36 K1 104 Neurospora Crassa MAAESKTGLAVGLKKGHKTTARVSKPRVSRTKGHLSKRTAFVRSIVQEVAGLAPYERRVIELLRNSKDKRARKLAKKRLGTFGRAKAKVEDLQRVIAEARRAGH
40S ribosomal protein S9 K2 190 Neurospora Crassa MAPRSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARQLLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTCVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKKAKAAEGGEAAEEEDEE
Ribosomal protein L37 L1 92 Neurospora Crassa MTKGTSSFGKRHTKTHGLCRRCGRRSLHNQKKVCASCGYPAAKTRKYNWSEKAKRRKTTGTGRLRYLSTVSRKFKNGFQTGVPKGSKGPVAA
Probable 40s ribosomal protein s10-b L2 163 Neurospora Crassa MLIPKADRKAIHEYLFREGVMVAEKNYESTHETGIRNLYVIKACQSLTSRGYVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEIVPATHIKSQRSHAPPRGMLGGEERRERPFGGRGRGDREGGYRRREAGEGKEGGAPGEFAPQFRGGFGRGRAGRGEAPPS
60S ribosomal protein L38 M1 80 Neurospora Crassa MPQEIGDIKKFIEICRRKDASAARIKKNKATQQIKFKVRCQKYLYTLVLKDSDKAEKLKASLPPSLTIADVAKRNKKQTA
40S ribosomal protein S11 M2 161 Neurospora Crassa MATELTVQSERAFQKQPHIFLNSKTKVKSARPGKGGRRWYKDVGLGFRTPAAAIEGQYIDKKCPFTGQVSIRGRILSGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRVEEGDKVTVGQCRPLSKTVRFNVLRVLPRTGKSVKKFAKF
60S ribosomal protein L39 N1 51 Neurospora Crassa MPSHKTFRVKQKLAKAQKQNRPIPQWIRLRTGNTIRYNAKRRHWRKTRLGL
40S ribosomal protein S12 N2 147 Neurospora Crassa MSDVEENTVPASEEVEVSADAAPKGQMSVLDALKGVLKISLMHDGLARGLREASKALDRREAHMCVLNESCEEEAYKKLVIALCSEHKIPLIKVPDGKQLGEWAGLCVLDREGNARKVVNCSCVVVKNWGEMSSEREILLNYFQTEQ
60S ribosomal protein L40 O1 52 Neurospora Crassa MIEPSLKALASKFNCDKMICRKCYARLPPRATNCRKRKCGHTNQLRPKKKLK
60S ribosomal protein L27 (eL27) B1 135 Neurospora Crassa MKFLKTSRVCLVTRGRYAGKKVVIIQPVDNGSKTHPYGHAIVAGIERYPSKITRRMSKTRQEKRSKVKPFIKVINYNHLMPTRYTLELEGLKGSVSAETFKEVSQREDAKKTVKKVLEERYTSGKNRWFFTPLRF
40S ribosomal protein S13 O2 151 Neurospora Crassa MGRMHSKGKGISASAIPYSRNPPSWLKTTPEQVVDQICKLAKKGATPSQIGVILRDSHGIAQVKVVTGNKILRILKSNGLAPDLPEDLYMLIKKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYKTVGVLPPTWKYESSTASTIVS
hypothetical protein NCU16635 (eL41) P1 25 Neurospora Crassa MRAKWRKKRVRRLKRKRRKMRARSK
40S ribosomal protein S14 (uS11) P2 150 Neurospora Crassa MPPKKAARPAQENISLGPQIREGELVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKIRATGGNGTKTPGPGAQSALRALARSGMKIGRIEDVTPTPSDSTRRKGGRRGRRL
60S ribosomal protein L44 Q1 106 Neurospora Crassa MVNVPKTRKTYCAGRSCGKHTLHKVTQYKAGKASAFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECSVCKQKKQLPLKRCKHFELGGDKKTKGAALVF
Ribosomal protein S12 Q2 152 Neurospora Crassa MADEYNAEEAAELKKKRTFRKFSYRGIDLDALLDLGSDELRDVVHARARRRINRGLKRKPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
60S ribosomal protein L43 R1 92 Neurospora Crassa MSKRTKKVGISGKYGTRYGASLRKLVKKQEVSQHARYTCTFCGKNTVRRSSVGIWSCKACKKTLAGGAYTVSTPAAAAMRSTLRRLREITEV
40S ribosomal protein S16 R2 142 Neurospora Crassa MATQAVQVFGKKKNATAVARCVQGKGLIKVNGVPLKLYAPEILRAKLYEPILLLGTDKFAEVDIRLKVSGGGHVSQVYAVRQAIAKAIVAYYAKYVDEHSKNTLKTALIQFDRTLLVADPRRCEPKKFGGKGARSRFQKSYR
Ribosomal_L28e domain-containing protein S1 150 Neurospora Crassa MSLSNVSADLIWEITRSHNSFLVKRKSGGGVQFSRDPLNLTNKHSRKYAGFVNDKAVGVVPGEKGGVVVTTKKAGSINKPAARYTVAFGANKTARKTYKAIARQVAGYRSDLLKAAVARASAIRRSQRAVKPEPAQKLRGNAAKKAAASA
40S ribosomal protein S17 S2 146 Neurospora Crassa MGRVRTKTVKKSAKVIIERYYPKLTLDFETNKRICDEIAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSALDFTQNSESGQLDVDTETKDLLKHLGFDSIPVNVIPVTQAQPVERGRRFGDRPRRD
40S ribosomal protein S26E B2 119 Neurospora Crassa MVKKRKNNGRNKKGRGHVKPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYTVPKMYLKLQYCVSCAIHGKIVRVRSREGRRNRAPPPRVRYNKDGKKVTPTQGAKTA
40S ribosomal protein S18 T2 156 Neurospora Crassa MSLVSGEKSNFNHILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLSKRAGELTSEELERIVTIMQNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKKGN
40S ribosomal protein S19 U2 149 Neurospora Crassa MPGGVTVRDVEPHKFVNAYAAFLKRQGKLPVPGWVDTVKTGPAKEMPPQDIDWFYVRAASVARHVYLRKTVGVGRLRRVHGTAKNRGSRPSHHVEASGSVDRKVLQALEKIGVLEHDEEKGGRRITQQGQRDLDRIAQTVIEADEEDDE
Nascent peptide V1 4 Neurospora Crassa XXXX
40S ribosomal protein S20 V2 117 Neurospora Crassa MSSYNKDQKDFGEAPKVHRVRITLTSRKVQALEKVCSELVERAKTKDLRVKGPVRLPTKILKITTRKSPCGEGSKTWDLFEMRIHKRLIDLTAPTEIVKQIIVNIEAGVEVEVTIAA
40S ribosomal protein S21 W2 87 Neurospora Crassa MENDRGEIVDLYVPRKCSATGRIIKSKDHGSCQITIAKVDENGRAIQGENIIYALSGFVRAMGESDDSLNRLAQRDGLLKAVWNPQR
60S ribosomal protein L23 X1 139 Neurospora Crassa MAKQSRGAPGGKLKMTLGLPVGAIMNCADNSGARNLYIISVKGIGARLNRLPAGGVGDMVMATVKKGKPELRKKVHPAVIVRQSKPWKRFDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKEAAELWPRIASNSGVVM
40S ribosomal protein S22 X2 130 Neurospora Crassa MVRTSVLHDALNSINNAEKAGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEEVDDHRSGKIVVQLNGRMNKCGVISPRYNVRLAELEKWVVKLLPARQFGYVILTTSAGIMDHEEARRKHVSGKIIGFFY
60S ribosomal protein L24 Y1 156 Neurospora Crassa MRTYDDTFSGQRIYPGKGKLYVRGDSKIFRFQNGKSESLFLQRKNPRRIAWTVLYRRQHKKGISEEVAKKRSRRTVKAQRAIVGASLEVIKERRSMRPEARSAARLAAIKESKAKKQETQAAKKAEKAKNAANPKARVTSKQGAKGAPVKVAAKSR
60S ribosomal protein L28 C1 149 Neurospora Crassa MPTRFSKTRKHRGHVSAGKGRVGKHRKHPGGRGMAGGQHHHRTNLDKYHPGYFGKVGMRHFHLLRNHQWAPILNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLLGKGRLPQVPIVVRARYVSAEAERKIKEAGGVIELVA
40S ribosomal protein S23 Y2 145 Neurospora Crassa MSGGKPRGLNAARKLRNNRREQRWSDLHYKKRALGTAFKSSPFGGSSHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS
60S ribosomal protein L25 Z1 156 Neurospora Crassa MAPKDTKKGGASKAGKGAQAKKAAQAALKGVHSHKKTKVRYSTTFHRPKTLQLSRAPKYPRKSIPHEPRLDEHKVIVHPLNTEGALKKIEEQNTLVFIVDVKANKAQIKQALKKLYDIDTVKINTLIRPDGSKKAFARLTADVDALDIAATKLGLV
40S ribosomal protein S24 Z2 136 Neurospora Crassa MADSDSPVTLRTRKFIRNPLLGRKQMVVDILHPNRPNISKDELREKLATLYKATKDQVNVFGLRTQFGGGKTTGFALVYDSPEAMKKFEPHYRLVRVGLASKIEKASRQQRKQRKNRQKTLRGTAKVKGAKPKKEK
40S ribosomal protein S1 C2 256 Neurospora Crassa MAVGKNKRLSKGKKGLKKKTQDPFARKDWYGIKAPAPFNVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHSFRKVKLRVDEIQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDDYLLRLFAIAFTKRRPNQVKKTTYAASSQIRAIRRKMTEIIQREASSCTLTQLTSKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGALMSLHGESGSDEAGQKVEREFKETVLESV
60S ribosomal protein L2 D1 254 Neurospora Crassa MGRVIRNQRKGRGSIFTANTRLNKAPAKFRSLDYAERHGYIRGVVKEIIHDPGRGAPLARVVFNSPYKFKKQRETFIANEGMYTGQFIYAGKNAALTVGNVLPLGSVPEGTVVSNVEEKVGDRGAIGRTSGNYVTVVGHNPEEGKTRIKLPSGAKKVVSSSARGMIGIVAGGGRTDKPLLKASRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRYAAQGQKAGLIAARRTGLLRGTQKTKE
40S ribosomal protein S2 D2 265 Neurospora Crassa MADRGTSGPRGGGFASRGDRGGDRGRGRGGRGRGRRGGKSEEKEWQPVTKLGRLVKAGKIKSMEEIYLHSLPIKEYQIVDFFLPKLKDEVMKIKPVQKQTRAGQRTRFKAIVIIGDSEGHVGLGIKTSKEVATAIRAAIIIAKLSVIPVRRGYWGANLGLPHSLPVKESGKCGSVTVRLIPAPRGTSLVASPAVKRLLQLAGIEDAYTSSSGSTKTLENTLKATFAAVSNTYGFLTPNLWKETKLTRSPLEEFADTLREGKRYAN
60S ribosomal protein L3 E1 392 Neurospora Crassa MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYVKKHSDNNGAAITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHLMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKGDAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQGTLKKDLAASS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
tRNA t1 76 NA UUCCUCGUGGCCCAAUGGUCACGGCGUCUGGCUACGAACCAGAAGAUUCCAGGUUCAAGUCCUGGCGGGGAAGCCA
tRNA u1 76 NA UUCCUCGUGGCCCAAUGGUCACGGCGUCUGGCUACGAACCAGAAGAUUCCAGGUUCAAGUCCUGGCGGGGAAGCCA
mRNA w1 17 NA UUUUUUUUUUUUUUUUU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-06-25
Deposition Author(s): Becker, T. , Bell-Pedersen, D. , Sachs, M.S. , Shen, L. , Su, Z. , Wu, C. , Yang, K. , Zhang, J.