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FASTA Sequence PDB Format mmCIF Format
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7R2K

Elongated cascade complex from type i-a crispr-cas system

PDB DOI: 10.2210/pdb7r2k/pdb

Classification: ANTIVIRAL PROTEIN
Organism(s): Escherichia Coli , Pyrococcus Furiosus Dsm 3638

Deposited: 2022-02-04
Deposition Author(s): Hu, C. , Ke, A. , Nam, K.H. , Ni, D. , Stahlberg, H. , Terns, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

7r2k
Literature

Elongated cascade complex from type i-a crispr-cas system

Hu, C. , Ke, A. , Nam, K.H. , Ni, D. , Stahlberg, H. , Terns, M.

Primary Citation of Related Structures: 7R2K


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated helicase Cas3 A 651 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 ELTGFEPYDYQLRAWEKIREIMNNGGKVIIEVPTAGGKTETAVMPFFAGIYNNNWPVARLVYVLPTRSLVEKQAERLRNLVYKLLQLKGKSKEEAEKLARELVVVEYGLEKTHAFLGWVVVTTWDAFLYGLAAHRTVGNRFTFPAGAIAQSLVIFDEVQMYQDESMYMPRLLSLVVGILEEANVPLVIMSATIPSKLREMIAGDTEVITVDKNDKNKPSKGNVKVRLVEGDITDVLNDIKKILKNGKKVLVVRNTVRKAVETYQVLKKKLNDTLANPSDALLIHSRFTIGDRREKERALDSARLIVATQVVEAGLDLPNVGLVVTDIAPLDALIQRIGRCARRPGEEGEGIILIPVENCIEHEKIVRGLSELMEKIGEDTVVFAVVTSTNEYDRVVEIHYGEGKKNFVYVGDIDTARRVLEKKRSKKLPKDLYIIPYSVSPYPDPLVLLTTYDELSKIGEYLADTTKARKALDRVYKFHYENNIVPKEFASAYIYFKELKLFSAPPEYEKRSRPELYVLLYPMNIEKNERVEDKVIDNLETARIIRISYSVKEWKKSDVVIGRLMKEWDKNAEKWVWKVRKSFKIDPYEIYVIDAKYYNSELGFITNLSDTNSHTDSDSKVRTRNSEHSSKKNRSKGKKGQTSLENWGVRV
Cas11a C 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a E 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a F 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a G 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a H 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a I 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a J 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas7a K 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a L 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a M 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a N 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a O 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a P 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a R 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a T 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a V 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a W 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
CRISPR-associated endonuclease Cas3-HD Q 238 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 SCKAFQGQTLREHIEAMLAAWEIVKNKYIPSIIRVMKTVGVKFTEEDADKFMKTLIILHDVGKCSEVYQKHLSNNEPLRGFRHELVSAYYAYNILKDMFKDETIAFIGALVVMMHHEPILMGQIRSLDKEELTPEVVLDKLRTFNGVMEGTESFIKSMIKEKLGVIPKVPSPTQEDVLREVIRLSVLARHRPDSGKLRMVVGALLIPLVLCDYKGAKEREGESPKFAEVLRVEMMKAA
Type I-A CRISPR-associated protein Cas5 S 256 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MDILLVCLRFPFFSVAKRSYQVRTSFLLPPPSALKGALAKGLILLKPEKYASSSLDEAALKAIKEIESKLVDIKAVSVAPLSPLIRNAFLLKRLRNLESGSNAEKSDAMRREYTFTRELLVAYIFKNLTQEEKNLYLKAAMLIDVIGDTESLATPVWASFVKPEDKKAPLAFSAPYTEIYSLLSSKIQAKGKIRMYIEKMRVSPEYSKTKGPQEEIFYLPIEERRYKRIVYYARIYPPEVEKALTVDGEVLGIWIP
Cas8 Y 341 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 FNEFKTPQIDPIFDLYVAYGYVVSLIRGGAKEATLIPHGASYLIQTDVSNEEFRHGLVDALSSMLSLHIALARHSPREGGKLVSDADFSAGANINNVYWDSVPRNLEKLMKDLEKKRSVKGTATIPITLMPSAGKYMLKHFGVQGGNPIKVDLLNYALAWVGFHYYTPYIKYAKGDTTWIHIYQIAPVEEVDMISILSLKDLKMHLPHYYESNLDFLINRRLALLYHLLHSEALELFTEKEFVIHSYTLERSGNNQAIRSFEEEEIGKLMDFLWKLKRRDFYHAIKFIDDLLKKATEGALALIDAIMNERLEGFYTALKLGKKAGVVSSREIVAALEDIIC

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*TP*AP*CP*AP*AP*GP*GP*GP*A)-3') d 9 NA TACAAGGGA
crRNA (57-MER) u 57 NA AUUGAAAGUUGUAGUAUGCGGUCCUUGCGGCUGAGAGCACUUCAGGAGUUGCCCGCG
DNA (5'-D(P*TP*CP*CP*C)-3') x 4 NA TCCC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-02-04
Deposition Author(s): Hu, C. , Ke, A. , Nam, K.H. , Ni, D. , Stahlberg, H. , Terns, M.