PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7R21

Elongated cascade complex from type i-a crispr-cas system

PDB DOI: 10.2210/pdb7r21/pdb

Classification: ANTIVIRAL PROTEIN
Organism(s): Escherichia Coli , Pyrococcus Furiosus Dsm 3638

Deposited: 2022-02-04
Deposition Author(s): Hu, C. , Ke, A. , Nam, K.H. , Ni, D. , Stahlberg, H. , Terns, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

Literature

Elongated cascade complex from type i-a crispr-cas system

Hu, C. , Ke, A. , Nam, K.H. , Ni, D. , Stahlberg, H. , Terns, M.

Primary Citation of Related Structures: 7R21


Proteins
Molecule Chains Sequence Length Organism Sequence
Cas11a A 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a C 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a D 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a E 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a F 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a G 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas11a H 108 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 GGWIRNIGRYLSYLVDDTFEEYAYDVVDGIAKARTQEELLEGVYKALRLAPKLKKKAESKGCPPPRIPSPEDIEALEEKVEQLSNPKDLRKLAVSLALWAFASWNNCP
Cas7a I 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a J 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a K 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a L 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a M 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a N 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a O 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a Q 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a S 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Cas7a T 336 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MYVRISGRIRLNAHSLNAQGGGGTNYIEITKTKVTVRTENGWTVVEVPAITGNMLKHWHFVGFVDYFKTTPYGVNLTERALRYNGTRFGQGETTATKANGATVQLNDEATIIKELADADVHGFLAPKTGRRRVSLVKASFILPTEDFIKEVEGERLITAIKHNRVDVDEKGAIGSSKEGTAQMLFSREYATGLYGFSIVLDLGLVGIPQGLPVKFEENQPRPNIVIDPNERKARIESALKALIPMLSGYIGANLARSFPVFKVEELVAIASEGPIPALVHGFYEDYIEANRSIIKNARALGFNIEVFTYNVDLGEDIEATKVSSVEELVANLVKMV
Type I-A CRISPR-associated protein Cas5 P 256 Escherichia Coli , Pyrococcus Furiosus Dsm 3638 MDILLVCLRFPFFSVAKRSYQVRTSFLLPPPSALKGALAKGLILLKPEKYASSSLDEAALKAIKEIESKLVDIKAVSVAPLSPLIRNAFLLKRLRNLESGSNAEKSDAMRREYTFTRELLVAYIFKNLTQEEKNLYLKAAMLIDVIGDTESLATPVWASFVKPEDKKAPLAFSAPYTEIYSLLSSKIQAKGKIRMYIEKMRVSPEYSKTKGPQEEIFYLPIEERRYKRIVYYARIYPPEVEKALTVDGEVLGIWIP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
CrRNA (62-MER) r 62 NA AUUGAAAGUUGUAGUAUGCGGUCCUUGCGGCUGAGAGCACUUCAGGAGUUGCCCGCGCCAGC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-02-04
Deposition Author(s): Hu, C. , Ke, A. , Nam, K.H. , Ni, D. , Stahlberg, H. , Terns, M.