7QD6
Cryo-em structure of tn4430 tnpa transposase from tn3 family in complex with strand-transfer like dna product
PDB DOI: 10.2210/pdb7qd6/pdb
Classification: RECOMBINATION Organism(s): Bacillus Thuringiensis , Synthetic Construct
Deposited: 2021-11-26 Deposition Author(s): Aryanpour, N. , Efremov, R.G. , Hallet, B.F. , Oger, C.A. , Shkumatov, A.V.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.0 Å
Cryo-em structure of tn4430 tnpa transposase from tn3 family in complex with strand-transfer like dna product
Aryanpour, N. , Efremov, R.G. , Hallet, B.F. , Oger, C.A. , Shkumatov, A.V.
Primary Citation of Related Structures: 7QD6
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Transposase for transposon Tn4430 | A | 1014 | Bacillus Thuringiensis , Synthetic Construct | MGVKQLLSEAQRNELMDLSRLTEWDLVTFHTFSKHDLHLILKHRRGYNRLGFALQLVLIRYPGWSLTEYKDIPQYVVAYVASQLQIPPEEFLVYAKRGNTLWEHLGEIRTEYGYQNFSSEYKETLLQFLVQQAMDNNNTLYLIEITISTLRKMKVILPAMYVIEDIVWEAKQQADQKVYSILHDGLVQEQKDQLDALLLPTINGKSPLAWLKDVPAQPSPESFLKVIDRLQFVQKIGLTIDTTKINTNRLRQLARLGSKYEPYAFRRFNEVKRYSMLVSFLLEITQDLIDYAIEIHDRLMMNLQTKGKKEQDEIQQANGKKLNEKILQFITVCGTLIEAKETGKDAFAALDEVMSWNEMVESVEEAKQLSRPLNYDYLDLLNTRYSYVRRYAPTLLRSLHFRATKSGEPVLQALDTIHELNETGKRKVPHGAPLHFVSNRWQKHVYDDDGNINRHYYELAALTELRNHIRSGDIFVSGSRHHKAFDDYLIPYDEWNEVSNIPNGLTAPLKAEDYITDRINRLNEHLEWLSKNSEKLEGVDISQGKLHVERLDRGTPEEAKAFSKLLHSMLPRIKLTDLLIEVASWTGFHDQFIHASTNQSPDQEEQNIVLATLMAMGTNIGLTKMAEATPGISYRQMANASQWRMYDDAMVRAQSILVNFQKEQKLSSYWGDGTTSSSDGMRLSIAVRSLHADSNPHYGTGKGGTIYRFVSDQLSAYHVKVITTNARDALHVLDGLLHHETDLKIEEHYTDTAGYTDQVFALTHLLGFRFAPRIRDLADTKLFSIPGGEEYENVQALLKGKINVKLIKENYEDIRRLAYSVQTGKVSSALIMGKLGSYARQNKLATALGEMGRIEKTLFTLDYISNKAVRRRVQKGLNKGEAINALARIIFFGQRGEFRERALQDQLQRARALNIIINAISVWNTVYMEKAVEELKARGEFREDLMPYAWPLGWEHINFLGEYKFEGLHDTGQMNLRPLRIKEPFYSPIRSFLEQKLISEEDLNSAVDHHHHHH |
| Transposase for transposon Tn4430 | D | 1014 | Bacillus Thuringiensis , Synthetic Construct | MGVKQLLSEAQRNELMDLSRLTEWDLVTFHTFSKHDLHLILKHRRGYNRLGFALQLVLIRYPGWSLTEYKDIPQYVVAYVASQLQIPPEEFLVYAKRGNTLWEHLGEIRTEYGYQNFSSEYKETLLQFLVQQAMDNNNTLYLIEITISTLRKMKVILPAMYVIEDIVWEAKQQADQKVYSILHDGLVQEQKDQLDALLLPTINGKSPLAWLKDVPAQPSPESFLKVIDRLQFVQKIGLTIDTTKINTNRLRQLARLGSKYEPYAFRRFNEVKRYSMLVSFLLEITQDLIDYAIEIHDRLMMNLQTKGKKEQDEIQQANGKKLNEKILQFITVCGTLIEAKETGKDAFAALDEVMSWNEMVESVEEAKQLSRPLNYDYLDLLNTRYSYVRRYAPTLLRSLHFRATKSGEPVLQALDTIHELNETGKRKVPHGAPLHFVSNRWQKHVYDDDGNINRHYYELAALTELRNHIRSGDIFVSGSRHHKAFDDYLIPYDEWNEVSNIPNGLTAPLKAEDYITDRINRLNEHLEWLSKNSEKLEGVDISQGKLHVERLDRGTPEEAKAFSKLLHSMLPRIKLTDLLIEVASWTGFHDQFIHASTNQSPDQEEQNIVLATLMAMGTNIGLTKMAEATPGISYRQMANASQWRMYDDAMVRAQSILVNFQKEQKLSSYWGDGTTSSSDGMRLSIAVRSLHADSNPHYGTGKGGTIYRFVSDQLSAYHVKVITTNARDALHVLDGLLHHETDLKIEEHYTDTAGYTDQVFALTHLLGFRFAPRIRDLADTKLFSIPGGEEYENVQALLKGKINVKLIKENYEDIRRLAYSVQTGKVSSALIMGKLGSYARQNKLATALGEMGRIEKTLFTLDYISNKAVRRRVQKGLNKGEAINALARIIFFGQRGEFRERALQDQLQRARALNIIINAISVWNTVYMEKAVEELKARGEFREDLMPYAWPLGWEHINFLGEYKFEGLHDTGQMNLRPLRIKEPFYSPIRSFLEQKLISEEDLNSAVDHHHHHH |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| IR71st non transferred strand | b | 71 | NA | CTCTAGCTCGAGATGCATCCATGGGGGTACCGCCAGCATTTCGGAAAAAAACCACGCTAAGATCCTCTAGG |
| IR71st non transferred strand | e | 71 | NA | CTCTAGCTCGAGATGCATCCATGGGGGTACCGCCAGCATTTCGGAAAAAAACCACGCTAAGATCCTCTAGG |
| IR71st transferred strand | c | 78 | NA | GGCAAAGATGTCCTAGTTTAGTTGGCTGATCCTAGAGGATCTTAGCGTGGTTTTTTTCCGAAATGCTGGCGGTACCCC |
| IR71st transferred strand | f | 78 | NA | GGCAAAGATGTCCTAGTTTAGTTGGCTGATCCTAGAGGATCTTAGCGTGGTTTTTTTCCGAAATGCTGGCGGTACCCC |
| IR71st transferred strand | g | 23 | NA | CATGGATGCATCTCGAGCTAGAG |
| IR71st transferred strand | h | 23 | NA | CATGGATGCATCTCGAGCTAGAG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-11-26 Deposition Author(s): Aryanpour, N. , Efremov, R.G. , Hallet, B.F. , Oger, C.A. , Shkumatov, A.V.