7PSX
Structure of hoxb13 bound to hydroxymethylated dna
PDB DOI: 10.2210/pdb7psx/pdb
Classification: DNA BINDING PROTEIN Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2021-09-24 Deposition Author(s): Morgunova, E. , Popov, A. , Taipale, J. , Yin, Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2 Å
Structure of hoxb13 bound to hydroxymethylated dna
Morgunova, E. , Popov, A. , Taipale, J. , Yin, Y.
Primary Citation of Related Structures: 7PSX
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Homeobox protein Hox-B13 | A | 61 | Homo Sapiens , Synthetic Construct | RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAK |
| Homeobox protein Hox-B13 | B | 61 | Homo Sapiens , Synthetic Construct | RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAK |
| Homeobox protein Hox-B13 | G | 61 | Homo Sapiens , Synthetic Construct | RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAK |
| Homeobox protein Hox-B13 | J | 61 | Homo Sapiens , Synthetic Construct | RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*GP*GP*TP*CP*C)-3') | c | 18 | NA | TTGTGTTTTATGAGGTCC |
| DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*GP*GP*TP*CP*C)-3') | d | 18 | NA | TTGTGTTTTATGAGGTCC |
| DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*GP*GP*TP*CP*C)-3') | h | 18 | NA | TTGTGTTTTATGAGGTCC |
| DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*GP*GP*TP*CP*C)-3') | k | 18 | NA | TTGTGTTTTATGAGGTCC |
| DNA (5'-D(P*GP*GP*AP*CP*CP*TP*5HCP*AP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') | f | 18 | NA | GGACCTXATAAAACACAA |
| DNA (5'-D(P*GP*GP*AP*CP*CP*TP*5HCP*AP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') | e | 18 | NA | GGACCTXATAAAACACAA |
| DNA (5'-D(P*GP*GP*AP*CP*CP*TP*5HCP*AP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') | i | 18 | NA | GGACCTXATAAAACACAA |
| DNA (5'-D(P*GP*GP*AP*CP*CP*TP*5HCP*AP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') | l | 18 | NA | GGACCTXATAAAACACAA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2021-09-24 Deposition Author(s): Morgunova, E. , Popov, A. , Taipale, J. , Yin, Y.