7PQE
Structure of sidj/cam bound to sdea in post-catalysis state
PDB DOI: 10.2210/pdb7pqe/pdb
Classification: LIGASE Organism(s): Salmonella Enterica , Staphylococcus Epidermidis (Strain Atcc 35984 / Rp62A)
Deposited: 2021-09-17 Deposition Author(s): Adams, M. , Bhogaraju, S.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.7 Å
Structure of sidj/cam bound to sdea in post-catalysis state
Primary Citation of Related Structures: 7PQE
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Ubiquitinating/deubiquitinating enzyme SdeA | A | 979 | Salmonella Enterica , Staphylococcus Epidermidis (Strain Atcc 35984 / Rp62A) | HHHHHHSAGLEVLFQGPMVGFSLYTDDTVKAAAQYAYDNYLGKPYTGSVESAPANFGGRMVYRQHHGLSHTLRTMAYAELIVEEARKAKLRGETLGKFKDGRTIADVTPQELKKIMIAQAFFVAGRDDEASDAKNYQKYHEQSRDAFLKYVKDNESTLIPDVFKDQEDVNFYARVIEDKSHDWESTPAHVLINQGHMVDLVRVKQPPESFLQRYFSSMQRWIGSQATEAVFGIQRQFFHATYEVVAGFDSDNKEPHLVVSGLGRYVIGEDGQPIREAPKKGQKEGDLKVFPQTYKLKENERLMRVDEFLKLPEIQNTFPGSGKHLQGGMPGMNEMDYWNRLNSLNRARCENDVDFCLKQLQTAHDKAKIEPIKQAFQSSKGKERRQPNVDEIAAARIIQQILANPDCIHDDHVLINGQKLEQQFFRDLLAKCEMAVVGSLLNDTDIGNIDTLMRHEKDTEFHSTNPEAVPVKIGEYWINDQRINNSSGNITQKKHDLIFLMQNDAWYFSRVNAIAQNRDKGSTFKEVLITTLMTPLTSKALVDTSQAKPPTRLFRGLNLSEEFTKGLIDQANAMIANTTERLFTDHSPEAFKQIKLNDLSKMSGRTNASTTTEIKLVKETWDSNVIFEMLDPDGLLHSKQVGRHGEGTESEFSVYLPEDVALVPVKVTLDGKTQKGENRYVFTFVAVKSPDFTPRHESGYAVEPFLRMQAAKLAEVKSSIEKAQRAPDLETIFNLQNEVEAVQYSHLSTGYKNFLKNTVGPVLENSLSGLMESDTDTLSKALAAFPSDTQWSAFNFEEARQAKRQMDAIKQMVGNKVVLDALTQCQDALEKQNIAGALDALKKIPSEKEMGTIRRELREQIQSARQELESLQRAVVTPVVTDEKKVRERYDALIENTSKKITELETGKLPNLDAVKKGISNLSNLKQEVTVLRNEKIRMHVGTDKVDFSDVEKLEQQIQVIDTKLADAYLLEVTKQISA |
| Calmodulin-dependent glutamylase SidJ | C | 794 | Salmonella Enterica , Staphylococcus Epidermidis (Strain Atcc 35984 / Rp62A) | HHHHHHSAGLEVLFQGPMVKQYYFARRGETSTHDTSLPPPVKVLSGRSIPLKEIPFETTRNELVQIYLTSVDQLIKSNKLNSIPSQQIASHYLFLRSLANSETDGIKKNQILSLAKPLGIYLASKEPHVWKTINELIEKSEYPIIHYLKNNRAHSNFMLALIHEYHKEPLTKNQSAFVQKFRDSSVFLFPNPIYTAWLAHSYDEDSSFNPMFRERLSTNFYHSTLTDNLLLRTEPKEVTLSSEHHYKKEKGPIDSSFRYQMSSDRLLRIQGRTLLFSTPQNDVVAVKVQKRGEPKSTLEEEFQMADYLLKHQSRLDVYSKLPQPLGQYSVKKSEILEISRGSLDFERFKTLIGDSKDLEVYVYKAPLTYFTYLHDKNQDLEDLTASVKTNVHDLFVLLREGIMFPQLADIFHTHFGEDEREDKGRYQALVQLLNVLQFQLGRIDKWQKAVEYVNLRSSGLADLGDSLPITSLFTSSDFTKHYFSALLTGGYHPTFFDKSSGTANSLFTGKRRLFGNYLYLNTIAEYLLVIQLTLGSYGDKVTRDMMDKPKKEAVWRELANVMFTSCAEAIHIMTGIPQSRALTLLKQRANIEKHFRQTQFWMTPDYSKLDEDTLQMEQYSIYSGEPEYEFTDKLVSGVGLSVDGTHQDLGGYNRESPLRELEKLLYATVTLIEGTMQLDKEFFKQLQQVEKILSGEIKTDANSCFEAVAQLLDLARPRCHFQKRLVLSYYEEAKLKYPSAPTDAYDSRFQVVAKTNAAITIQRFWRETRKNLSENSDIESEKPESERTTDKRLK |
| Calmodulin | B | 168 | Salmonella Enterica , Staphylococcus Epidermidis (Strain Atcc 35984 / Rp62A) | HHHHHHSSGLEVLFQGPHMMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-09-17 Deposition Author(s): Adams, M. , Bhogaraju, S.