7PLA
Cryo-em structure of shcas12k in complex with a sgrna and a dsdna target
PDB DOI: 10.2210/pdb7pla/pdb
Classification: DNA BINDING PROTEIN Organism(s): Scytonema Hofmannii , Synthetic Construct
Deposited: 2021-08-30 Deposition Author(s): Jinek, M. , Schmitz, M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.04 Å
Cryo-em structure of shcas12k in complex with a sgrna and a dsdna target
Primary Citation of Related Structures: 7PLA
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ShCas12k | A | 641 | Scytonema Hofmannii , Synthetic Construct | SNASQITIQARLISFESNRQQLWKLMADLNTPLINELLCQLGQHPDFEKWQQKGKLPSTVVSQLCQPLKTDPRFAGQPSRLYMSAIHIVDYIYKSWLAIQKRLQQQLDGKTRWLEMLNSDAELVELSGDTLEAIRVKAAEILAIAMPASESDSASPKGKKGKKEKKPSSSSPKRSLSKTLFDAYQETEDIKSRSAISYLLKNGCKLTDKEEDSEKFAKRRRQVEIQIQRLTEKLISRMPKGRDLTNAKWLETLLTATTTVAEDNAQAKRWQDILLTRSSSLPFPLVFETNEDMVWSKNQKGRLCVHFNGLSDLIFEVYCGNRQLHWFQRFLEDQQTKRKSKNQHSSGLFTLRNGHLVWLEGEGKGEPWNLHHLTLYCCVDNRLWTEEGTEIVRQEKADEITKFITNMKKKSDLSDTQQALIQRKQSTLTRINNSFERPSQPLYQGQSHILVGVSLGLEKPATVAVVDAIANKVLAYRSIKQLLGDNYELLNRQRRQQQYLSHERHKAQKNFSPNQFGASELGQHIDRLLAKAIVALARTYKAGSIVLPKLGDMREVVQSEIQAIAEQKFPGYIEGQQKYAKQYRVNVHRWSYGRLIQSIQSKAAQTGIVIEEGKQPIRGSPHDKAKELALSAYNLRLTRRS |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| sgRNA | b | 256 | NA | GGAUAUUAAUAGCGCCGCAAUUCAUGCUGCUUGCAGCCUCUGAAUUUUGUUAAAUGAGGGUUAGUUUGACUGUAUAAAUACAGUCUUGCUUUCUGACCCUGGUAGCUGCUCACCCUGAUGCUGCUGUCAAUAGACAGGAUAGGUGCGCUCCCAGCAAUAAGGGCGCGGAUGUACUGCUGUAGUGGCUACUGAAUCACCCCCGAUCAAGGGGGAACCCUAAAUGGGUUGAAAGGAGAAGUCAUUUAAUAAGGCCACU |
| DNA target strand | c | 50 | NA | GTTTAACAGTGGCCTTATTAAATGACTTCTCAACCTCCTACGTATCGTAG |
| DNA non-target strand | d | 50 | NA | CTACGATACGTAGGAGGTTGAGAAGTCATTTAATAAGGCCACTGTTAAAC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-08-30 Deposition Author(s): Jinek, M. , Schmitz, M.