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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7PIN

Stacked compact dunaliella psii

PDB DOI: 10.2210/pdb7pin/pdb

Classification: PHOTOSYNTHESIS
Organism(s): Dunaliella Salina

Deposited: 2021-08-22
Deposition Author(s): Caspy, I. , Fadeeva, M. , Mazor, Y. , Nelson, N.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

7pin
Literature

Stacked compact dunaliella psii

Caspy, I. , Fadeeva, M. , Mazor, Y. , Nelson, N.

Primary Citation of Related Structures: 7PIN


Proteins
Molecule Chains Sequence Length Organism Sequence
Photosystem II protein D1 A 336 Dunaliella Salina ENTSLWARFCEWITSTENRLYIGWFGVIMIPTLLTAISVYIIAFIAAPPVDIDGIREPVSGSLLYGNNIITGAVVPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVCHFFLGVCCYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMFGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAVWPVVCIWLTALGISTMAFNLNGFNFNQSVVDSNGRVLNTWADIINRANLGMEVMHERNAHNFPLDLA
Photosystem II protein D1 A1 336 Dunaliella Salina ENTSLWARFCEWITSTENRLYIGWFGVIMIPTLLTAISVYIIAFIAAPPVDIDGIREPVSGSLLYGNNIITGAVVPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVCHFFLGVCCYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMFGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAVWPVVCIWLTALGISTMAFNLNGFNFNQSVVDSNGRVLNTWADIINRANLGMEVMHERNAHNFPLDLA
PsbJ J 36 Dunaliella Salina IGRIPLWLVGTVVGLLAIGLLAIFFYGSYVGLGSSL
PsbJ J1 36 Dunaliella Salina IGRIPLWLVGTVVGLLAIGLLAIFFYGSYVGLGSSL
Photosystem II reaction center protein K K 37 Dunaliella Salina KLPEAYAPFSPIVDVLPIIPVLFILLAFVWQASVSFR
Photosystem II reaction center protein K K1 37 Dunaliella Salina KLPEAYAPFSPIVDVLPIIPVLFILLAFVWQASVSFR
Photosystem II reaction center protein L L 38 Dunaliella Salina MARPNPNKQVVELNRSSLYWGLLLIFVLAVLFSSYIFN
Photosystem II reaction center protein L L1 38 Dunaliella Salina MARPNPNKQVVELNRSSLYWGLLLIFVLAVLFSSYIFN
PsbM M 31 Dunaliella Salina VNILGLTATALFIIIPTSFLLILYVKTAASE
PsbM M1 31 Dunaliella Salina VNILGLTATALFIIIPTSFLLILYVKTAASE
PsbO O 238 Dunaliella Salina LTYDELQGLTYLQVKGTGIANTCPVVEQGTSNVRELKPGDYKLEKFCMEPTSFTVKEEDAKGREEFVKTKLLTRLTYGLDGMNGSMKINNDGSVEFREDEGLDYAATTVKLPGGEYVPFLFTIKEFDGKGTLDSFSGDFLVPSYRGSTFLDPKGRGGATGYDNAIALPAKADADEIQRLNNKSYTPGKGSAVFSVAKVDTETGEIAGVFESIQPSDTEMGAHPAKDIKITGLWYGQLT
PsbO O1 238 Dunaliella Salina LTYDELQGLTYLQVKGTGIANTCPVVEQGTSNVRELKPGDYKLEKFCMEPTSFTVKEEDAKGREEFVKTKLLTRLTYGLDGMNGSMKINNDGSVEFREDEGLDYAATTVKLPGGEYVPFLFTIKEFDGKGTLDSFSGDFLVPSYRGSTFLDPKGRGGATGYDNAIALPAKADADEIQRLNNKSYTPGKGSAVFSVAKVDTETGEIAGVFESIQPSDTEMGAHPAKDIKITGLWYGQLT
PsbP P 187 Dunaliella Salina AYGEGANVFGRVTNKSGFVPYAGDSFALLLPSKWNPSDEKEVDSIVLRYADNFDAVNNVYVIAQDTDKSSIQDYGSPEEFISQFGYLLGRQAWAGQTVSEGGFDANKVSSAALLGVATEKDKKGKTYYKFEILSRTADGNEGGRHQLVKATVSNGKLYLLKVQAGDKRWFKGTDKECLGVLDSFTVV
PsbP P1 187 Dunaliella Salina AYGEGANVFGRVTNKSGFVPYAGDSFALLLPSKWNPSDEKEVDSIVLRYADNFDAVNNVYVIAQDTDKSSIQDYGSPEEFISQFGYLLGRQAWAGQTVSEGGFDANKVSSAALLGVATEKDKKGKTYYKFEILSRTADGNEGGRHQLVKATVSNGKLYLLKVQAGDKRWFKGTDKECLGVLDSFTVV
Photosystem II reaction center protein T T 30 Dunaliella Salina MEALVYTFLLIGTLGIIFFSIFFREPPRIA
Photosystem II reaction center protein T T1 30 Dunaliella Salina MEALVYTFLLIGTLGIIFFSIFFREPPRIA
PsbW W 44 Dunaliella Salina LVDDRMNGDGTGLPFGVNDGILGWVIAGTLGTIWAIYFVSQKDL
PsbW W1 44 Dunaliella Salina LVDDRMNGDGTGLPFGVNDGILGWVIAGTLGTIWAIYFVSQKDL
PsbX X 30 Dunaliella Salina SVTPSLKNFLLSLVAGAVVLAAIAGAVTAV
PsbX X1 30 Dunaliella Salina SVTPSLKNFLLSLVAGAVVLAAIAGAVTAV
Photosystem II reaction center protein Z Z 61 Dunaliella Salina MTSILQIALLGLVLVSFALVVGVPVVFASPNGWTENKGVVFSGLSVWFLLVFAVGVFNSFA
Photosystem II reaction center protein Z Z1 61 Dunaliella Salina MTSILQIALLGLVLVSFALVVGVPVVFASPNGWTENKGVVFSGLSVWFLLVFAVGVFNSFA
Photosystem II CP47 reaction center protein B 484 Dunaliella Salina GLPWYRVHTVVINDPGRLISVHLMHTALVAGWAGAMTLFEIAVFDPSDPVLNPMWRQGMFVLPFLTRLGVTQSWGGWTISGETSSNPGIWSYEGAAASHIVLSGLLFLASVWHWVYWDLELFRDPRTGKTALDLPKIFGIHLFLAGLLCFGFGAFHVTGVFGPGIWVSDPYGLTGSVQPVAPSWGAEGFDPYNPGGVPAHHIAAGILGVLAGLFHLCVRPSIRLYFGLSMGSIESVLSSSIAAVFWAAFVVAGTMWYGSAATPIELFGPTRYQWDQGFFQQEIQKRVAQSTSEGLSVSEAWAKIPEKLAFYDYIGNNPAKGGLFRTGAMNSGDGIAVGWLGHASFKDQEGRELFVRRMPTFFETFPVVLIDKDGVVRADVPFRKAESKYSIEQVGVSVTFYGGELNGLTFTDPSTVKKYARKAQLGEIFEFDRSTLQSDGVFRSSPRGWFTFGHLSFALLFFFGHIWHGSRTIFRDVFAGIDED
Photosystem II CP47 reaction center protein B1 484 Dunaliella Salina GLPWYRVHTVVINDPGRLISVHLMHTALVAGWAGAMTLFEIAVFDPSDPVLNPMWRQGMFVLPFLTRLGVTQSWGGWTISGETSSNPGIWSYEGAAASHIVLSGLLFLASVWHWVYWDLELFRDPRTGKTALDLPKIFGIHLFLAGLLCFGFGAFHVTGVFGPGIWVSDPYGLTGSVQPVAPSWGAEGFDPYNPGGVPAHHIAAGILGVLAGLFHLCVRPSIRLYFGLSMGSIESVLSSSIAAVFWAAFVVAGTMWYGSAATPIELFGPTRYQWDQGFFQQEIQKRVAQSTSEGLSVSEAWAKIPEKLAFYDYIGNNPAKGGLFRTGAMNSGDGIAVGWLGHASFKDQEGRELFVRRMPTFFETFPVVLIDKDGVVRADVPFRKAESKYSIEQVGVSVTFYGGELNGLTFTDPSTVKKYARKAQLGEIFEFDRSTLQSDGVFRSSPRGWFTFGHLSFALLFFFGHIWHGSRTIFRDVFAGIDED
LHCII M3 N 222 Dunaliella Salina TINQFYGPDRNKWLGPYSTNTPPYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWALLGALGMVTPELLQDDDGIMFGESAIWFKAGAAIFQEGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPEAFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTPQ
LHCII M3 N1 222 Dunaliella Salina TINQFYGPDRNKWLGPYSTNTPPYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWALLGALGMVTPELLQDDDGIMFGESAIWFKAGAAIFQEGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPEAFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTPQ
Chlorophyll a-b binding protein, chloroplastic G 221 Dunaliella Salina EFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFAAGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNNAFASATKFTPG
Chlorophyll a-b binding protein, chloroplastic G1 221 Dunaliella Salina EFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFAAGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNNAFASATKFTPG
CP29 R 196 Dunaliella Salina SLSYLDGHLPGDMGFDPLHLSSPTVSLQIGVDEEDQNQAQNKKGDVEAIFRPEVFGLARFRETEVIHGRWAMLGTLGAIVGEAATGVSWVDAGKVELDGAQYLGQSLPFSISQLIWIEAILVGGVEVLRNNELDLEKRIYPGGAFDPLNLADEEDEEKSFRLKTAEIKHGRLAMVAFLGFGIQAAATGEGALGSLA
CP29 R1 196 Dunaliella Salina SLSYLDGHLPGDMGFDPLHLSSPTVSLQIGVDEEDQNQAQNKKGDVEAIFRPEVFGLARFRETEVIHGRWAMLGTLGAIVGEAATGVSWVDAGKVELDGAQYLGQSLPFSISQLIWIEAILVGGVEVLRNNELDLEKRIYPGGAFDPLNLADEEDEEKSFRLKTAEIKHGRLAMVAFLGFGIQAAATGEGALGSLA
CP26 S 243 Dunaliella Salina PDLEKWYGPDRKLFLPGGLLDRDDVPEYLNGELAGDYGYDPLGLGKDEEQVEKYRANELLHARWAMLAAAGIIIPEGLQANGADIKGGTWFETGAEMLNGGTLNYFAVPFGVVQNPLPLAAVTLIEIVLLGAVEKFRVDGTGPAGFSPGVGKFDSDIFDGLDKLYPGGPFDPLNLADDPEVFAELQVKEIKNGRLAMIAVLAFAIQSYVTGEGPYANITKHLSDPFGYNLLTVLQGDDRVPTL
CP26 S1 243 Dunaliella Salina PDLEKWYGPDRKLFLPGGLLDRDDVPEYLNGELAGDYGYDPLGLGKDEEQVEKYRANELLHARWAMLAAAGIIIPEGLQANGADIKGGTWFETGAEMLNGGTLNYFAVPFGVVQNPLPLAAVTLIEIVLLGAVEKFRVDGTGPAGFSPGVGKFDSDIFDGLDKLYPGGPFDPLNLADDPEVFAELQVKEIKNGRLAMIAVLAFAIQSYVTGEGPYANITKHLSDPFGYNLLTVLQGDDRVPTL
LHCII M1 Y 222 Dunaliella Salina SAWYGPDRPLFLGSLSGEPPSYLTGEFPGDYGWDTAGLSADPTTFARYRTIELIHARWALLGALGIITPELLAKNGVPFSEDGAIWFKAGAEIFKEGGLNYLGNENLIHAQSILATLAVQVIVMGAAEGFRANGEAPGVEGLDPLYPGGPFDPLGLADDPEAFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPIQNLQDHLADPGVNNAFASATKFVPTP
LHCII M1 Y1 222 Dunaliella Salina SAWYGPDRPLFLGSLSGEPPSYLTGEFPGDYGWDTAGLSADPTTFARYRTIELIHARWALLGALGIITPELLAKNGVPFSEDGAIWFKAGAEIFKEGGLNYLGNENLIHAQSILATLAVQVIVMGAAEGFRANGEAPGVEGLDPLYPGGPFDPLGLADDPEAFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPIQNLQDHLADPGVNNAFASATKFVPTP
PsbU U 27 Dunaliella Salina QRVRTVLDMDDPAKEETVKELRKDINN
PsbU U1 27 Dunaliella Salina QRVRTVLDMDDPAKEETVKELRKDINN
Photosystem II reaction center protein Ycf12 V 32 Dunaliella Salina SLTLILQLVALFAVVAAGPLVVVLLSVRGGNL
Photosystem II reaction center protein Ycf12 V1 32 Dunaliella Salina SLTLILQLVALFAVVAAGPLVVVLLSVRGGNL
Photosystem II CP43 reaction center protein C 449 Dunaliella Salina GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMYEQGLILLPHIATLGYGVGPGGEVLDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFGYVWKDKNKMTNILGYHLIILGCGAWLLVLKALYFGGVYDTWAPGGGDVRIISNPTTNAAIIFGYIVKSPFGGDGWIVSVDNLEDIIGGHIWIGTLCILGGIWHIYTTPWPWARRAFVWSGEAYLSYSLAAVSLMGFTACCFAWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWVEPLRGPSGLDLVKLKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINAVNFVSPRSWLATSHFCLGFFFFVGHLWHAGRARAAAAGFEKGIDRVDEPVLSMRPLD
Photosystem II CP43 reaction center protein C1 449 Dunaliella Salina GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMYEQGLILLPHIATLGYGVGPGGEVLDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFGYVWKDKNKMTNILGYHLIILGCGAWLLVLKALYFGGVYDTWAPGGGDVRIISNPTTNAAIIFGYIVKSPFGGDGWIVSVDNLEDIIGGHIWIGTLCILGGIWHIYTTPWPWARRAFVWSGEAYLSYSLAAVSLMGFTACCFAWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWVEPLRGPSGLDLVKLKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINAVNFVSPRSWLATSHFCLGFFFFVGHLWHAGRARAAAAGFEKGIDRVDEPVLSMRPLD
Photosystem II D2 protein D 348 Dunaliella Salina IGTYQEKRTWFDDADDWLRQDRFVFVGWSGLLLLPCAYFAVGGWLTGCTFVTSWYTHGLASSYIEGCNFLTAAVSTPANSLGHSLLFVWGPEAQGDLTRWFQLGGLWAFVALHGAFGLIGFMLRQFEIARSVNLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVASIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHEKLTLPEEVLPRGNAL
Photosystem II D2 protein D1 348 Dunaliella Salina IGTYQEKRTWFDDADDWLRQDRFVFVGWSGLLLLPCAYFAVGGWLTGCTFVTSWYTHGLASSYIEGCNFLTAAVSTPANSLGHSLLFVWGPEAQGDLTRWFQLGGLWAFVALHGAFGLIGFMLRQFEIARSVNLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVASIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHEKLTLPEEVLPRGNAL
Cytochrome b559 subunit alpha E 76 Dunaliella Salina ERPFSDILTSIRYWVIHSITVPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTEDRQDAPLITDRFNALEQVKKLSAQ
Cytochrome b559 subunit alpha E1 76 Dunaliella Salina ERPFSDILTSIRYWVIHSITVPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTEDRQDAPLITDRFNALEQVKKLSAQ
Cytochrome b559 subunit beta F 31 Dunaliella Salina IFTVRWLAIHAIAVPTIFFLGAITAMQFIQR
Cytochrome b559 subunit beta F1 31 Dunaliella Salina IFTVRWLAIHAIAVPTIFFLGAITAMQFIQR
Photosystem II reaction center protein H H 67 Dunaliella Salina EPGIVTPLGTLLRPLNSEAGKVLPGWGTTVLMAVAILLFAVFLLIILEIYNSSLILDGVTNSWESLA
Photosystem II reaction center protein H H1 67 Dunaliella Salina EPGIVTPLGTLLRPLNSEAGKVLPGWGTTVLMAVAILLFAVFLLIILEIYNSSLILDGVTNSWESLA
Photosystem II reaction center protein I I 35 Dunaliella Salina MLTLKIFVYTVVTFFVGLFIFGFLSNDPSRNPGKG
Photosystem II reaction center protein I I1 35 Dunaliella Salina MLTLKIFVYTVVTFFVGLFIFGFLSNDPSRNPGKG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-08-22
Deposition Author(s): Caspy, I. , Fadeeva, M. , Mazor, Y. , Nelson, N.