PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7PIJ

Structure of staphylococcus capitis divalent metal ion transporter (dmt) by nabfab-fiducial assisted cryo-em

PDB DOI: 10.2210/pdb7pij/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Lama Glama , Staphylococcus Capitis , Synthetic Construct

Deposited: 2021-08-20
Deposition Author(s): Bloch, J.S. , Kossiakoff, A.A. , Kowal, J. , Locher, K.P. , Mukherjee, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.78 Å

7pij
Literature

Structure of staphylococcus capitis divalent metal ion transporter (dmt) by nabfab-fiducial assisted cryo-em

Bloch, J.S. , Kossiakoff, A.A. , Kowal, J. , Locher, K.P. , Mukherjee, S.

Primary Citation of Related Structures: 7PIJ


Proteins
Molecule Chains Sequence Length Organism Sequence
NabFab HC H 239 Lama Glama , Staphylococcus Capitis , Synthetic Construct EISEVQLVESGGGLVQPGGSLRLSCAASGFNFSYYSIHWVRQAPGKGLEWVAYISSSSSYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYQYWQYHASWYWNGGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
NabFab LC L 215 Lama Glama , Staphylococcus Capitis , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Divalent metal cation transporter MntH B 427 Lama Glama , Staphylococcus Capitis , Synthetic Construct MSVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLAAMLLQSMTVRLGIATGKDLAQMTRHFLSKPVAIIFWIIAELAIIATDIAEVIGSAIALDLIFGIPLIVGALITVFDVFLLLFIMRFGFRKIEAIVGTLIFTVLAIFVFEVFISSPQLTDILNGFVPHKEIVTNQGILYIALGIIGATIMPHNLYLHSSIVQSRKYDRHDNQEKAQAIKYATIDSNLQLSIAFVVNCLLLTLGAALFFGTKTNDLGGFYDLYHALKTEPVLGATLGGIMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLSIPNWLRRLITRALAVIPVIICLIIFKGNSEKIEQLLVFSQVFLSIALPFSLIPLQLATSNKKLMGPFINKTWVNIISWTLIVILSGLNVYLIIQTFQELALEVLFQGPHHHHHHHHHH
DMTNb16_4 N 131 Lama Glama , Staphylococcus Capitis , Synthetic Construct QRQLVESGGGLVQPGGSLRLSCAASRSIFSIDTAGWFRQAPGKEREGVATITRDGNANYADSVKGRFTISRDRARNTVYLQMNSLEPEDTAVYYCNAAIRTTVRTSAQEYWGKGTPVTVSSHHHHHHEPEA
Anti-Fab nanobody K 123 Lama Glama , Staphylococcus Capitis , Synthetic Construct GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-08-20
Deposition Author(s): Bloch, J.S. , Kossiakoff, A.A. , Kowal, J. , Locher, K.P. , Mukherjee, S.