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7PDY

A viral peptide from marek's disease virus bound to chicken mhc-ii molecule

PDB DOI: 10.2210/pdb7pdy/pdb

Classification: IMMUNE SYSTEM
Organism(s): Gallus Gallus , Marek'S Disease Herpesvirus (Strain Md11/75C/R2)

Deposited: 2021-08-09
Deposition Author(s): Cook, A.G. , Goryanin, A. , Halabi, S. , Kaufman, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.54 Å

Literature

A viral peptide from marek's disease virus bound to chicken mhc-ii molecule

Cook, A.G. , Goryanin, A. , Halabi, S. , Kaufman, J.

Primary Citation of Related Structures: 7PDY


Proteins
Molecule Chains Sequence Length Organism Sequence
MHC class II alpha chain A 191 Gallus Gallus , Marek'S Disease Herpesvirus (Strain Md11/75C/R2) DRRHVLLQAEFYQRSEGPDKAWAQFGFHFDADELFHVELDAAQTVWRLPEFGRFASFEAQGALQNMAVGKQNLEVMISNSNRSQQDFVTPELALFPAEAVSLEEPNVLICYADKFWPPVATMEWRRNGAVVSEGVYDSVYYGRPDLLFRKFSYLPFVPQRGDVYSCAVRHWGAEGPVQRMWEPEVPEPPSE
MHC class II alpha chain C 191 Gallus Gallus , Marek'S Disease Herpesvirus (Strain Md11/75C/R2) DRRHVLLQAEFYQRSEGPDKAWAQFGFHFDADELFHVELDAAQTVWRLPEFGRFASFEAQGALQNMAVGKQNLEVMISNSNRSQQDFVTPELALFPAEAVSLEEPNVLICYADKFWPPVATMEWRRNGAVVSEGVYDSVYYGRPDLLFRKFSYLPFVPQRGDVYSCAVRHWGAEGPVQRMWEPEVPEPPSE
MHC class II alpha chain E 191 Gallus Gallus , Marek'S Disease Herpesvirus (Strain Md11/75C/R2) DRRHVLLQAEFYQRSEGPDKAWAQFGFHFDADELFHVELDAAQTVWRLPEFGRFASFEAQGALQNMAVGKQNLEVMISNSNRSQQDFVTPELALFPAEAVSLEEPNVLICYADKFWPPVATMEWRRNGAVVSEGVYDSVYYGRPDLLFRKFSYLPFVPQRGDVYSCAVRHWGAEGPVQRMWEPEVPEPPSE
38 kDa phosphoprotein,MHC class II beta chain B 225 Gallus Gallus , Marek'S Disease Herpesvirus (Strain Md11/75C/R2) DRPAVVHSVRALMLAERQGGGGSGGGGSGGGGSFFYGKIGECHYLNGTERVRFLDRQIYNRQQFAHFDSDVGKFVADTPLGEPQAEYWNSNAELLENLMNEVDRVCRHNYGILESFTVQRSVEPKVRVSALQSGSLPETDRLACYVTGFYPPEIEVKWFLNGREETERVVSTDVMQNGDWTYQVLVVLETVPRRGDSYVCRVEHASLRQPISQAWEPPADAGRSK
38 kDa phosphoprotein,MHC class II beta chain D 225 Gallus Gallus , Marek'S Disease Herpesvirus (Strain Md11/75C/R2) DRPAVVHSVRALMLAERQGGGGSGGGGSGGGGSFFYGKIGECHYLNGTERVRFLDRQIYNRQQFAHFDSDVGKFVADTPLGEPQAEYWNSNAELLENLMNEVDRVCRHNYGILESFTVQRSVEPKVRVSALQSGSLPETDRLACYVTGFYPPEIEVKWFLNGREETERVVSTDVMQNGDWTYQVLVVLETVPRRGDSYVCRVEHASLRQPISQAWEPPADAGRSK
38 kDa phosphoprotein,MHC class II beta chain F 225 Gallus Gallus , Marek'S Disease Herpesvirus (Strain Md11/75C/R2) DRPAVVHSVRALMLAERQGGGGSGGGGSGGGGSFFYGKIGECHYLNGTERVRFLDRQIYNRQQFAHFDSDVGKFVADTPLGEPQAEYWNSNAELLENLMNEVDRVCRHNYGILESFTVQRSVEPKVRVSALQSGSLPETDRLACYVTGFYPPEIEVKWFLNGREETERVVSTDVMQNGDWTYQVLVVLETVPRRGDSYVCRVEHASLRQPISQAWEPPADAGRSK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-08-09
Deposition Author(s): Cook, A.G. , Goryanin, A. , Halabi, S. , Kaufman, J.