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7OZW

Cryo-em structure of hiv-1 reverse transcriptase with a dna aptamer in complex with fragment 166 at the transient p-pocket

PDB DOI: 10.2210/pdb7ozw/pdb

Classification: TRANSFERASE
Organism(s): Human Immunodeficiency Virus Type 1 Bh10 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) , Synthetic Construct

Deposited: 2021-06-28
Deposition Author(s): Das, K. , Singh, A.K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.38 Å

Literature

Cryo-em structure of hiv-1 reverse transcriptase with a dna aptamer in complex with fragment 166 at the transient p-pocket

Das, K. , Singh, A.K.

Primary Citation of Related Structures: 7OZW


Proteins
Molecule Chains Sequence Length Organism Sequence
Reverse transcriptase/ribonuclease H A 556 Human Immunodeficiency Virus Type 1 Bh10 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) , Synthetic Construct MVPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTNSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSA
Reverse transcriptase/ribonuclease H B 428 Human Immunodeficiency Virus Type 1 Bh10 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) , Synthetic Construct PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (37-MER) f 37 NA TAATATCCCCCCTTCGGTGCTTTGCACCGAAGGGGGG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-06-28
Deposition Author(s): Das, K. , Singh, A.K.