Cryo-em structure of the xenopus egg 80s ribosome
PDB DOI: 10.2210/pdb7oyc/pdb
Classification: RIBOSOME Organism(s): Mucilaginibacter Paludis Dsm 18603
Deposited: 2021-06-24 Deposition Author(s): Belacic, K. , Grishkovskaya, I. , Haselbach, D. , Kandolf, S. , Leesch, F. , Lorenzo-Orts, L. , Meinhart, A. , Pauli, A.
Cryo-em structure of the xenopus egg 80s ribosome
Belacic, K. , Grishkovskaya, I. , Haselbach, D. , Kandolf, S. , Leesch, F. , Lorenzo-Orts, L. , Meinhart, A. , Pauli, A.
Primary Citation of Related Structures: 7OYC
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Eukaryotic translation initiation factor 5A | 11 | 154 | Mucilaginibacter Paludis Dsm 18603 | MADDIDFTSGDAGASSTFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSGKKYEDICPSTHNMDVPNIKRCDYQLIGIIDNYLSLLSDSGDVREDLKIPDGDLGKEILAKHEAGEEILVTVLNAMSEECAVALKAMTK |
60S ribosomal protein L30 | C1 | 116 | Mucilaginibacter Paludis Dsm 18603 | MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQQAIEK |
40S ribosomal protein S28 | C2 | 69 | Mucilaginibacter Paludis Dsm 18603 | MEASRVQPIKLARVTKVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDVLTLLESEREARRLR |
60S ribosomal protein L31 | D1 | 125 | Mucilaginibacter Paludis Dsm 18603 | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGIGFKKRAPRALKEIRKFAVKEMRTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTNYKGLQTVNVDEN |
40S ribosomal protein S29 | D2 | 86 | Mucilaginibacter Paludis Dsm 18603 | MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVKNCDVLLAFQTEPRLAMLSYYSISLLEHHYLLD |
Rpl32 | E1 | 135 | Mucilaginibacter Paludis Dsm 18603 | MAALRPLTKPKIVKKRTKKFIRHQSDRYVKISRNWRKPRGIDNRARRRFKGQILMPNIGYGSNKKTKHMLPTGFKKFLVHNIKELEVLMMSNKSFCAEIAHNVSSKNRKTIVERAAQLAIKVTNPNARLRSEENE |
40S ribosomal protein S30 | E2 | 133 | Mucilaginibacter Paludis Dsm 18603 | MQLFVRGQSLHTLEVSGQETVSQIKDQISSLEGISSEDQVVLLAGSPLSEEHTLQQCGVCDLSTLDVVARLLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS |
60S ribosomal protein L35a | F1 | 110 | Mucilaginibacter Paludis Dsm 18603 | MSGRLWCKATFAGYKRGLRNQREHTALLKIEGVYARDETEFYFGKRCAYVYKAKNNTVTPGGKPNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI |
Ribosomal_S7 domain-containing protein | F2 | 203 | Mucilaginibacter Paludis Dsm 18603 | MSDWETVPVGAETPEIKLFGKWSTDDVQINDISLQDYIAVKEKYAKFLPHSGGRYAAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR |
60S ribosomal protein L34 | G1 | 117 | Mucilaginibacter Paludis Dsm 18603 | MAPRLTYRRRLSYNTTSNKTRLSRTPGNRIVYLYTKKVGKAPKSACGICPGRLRGIRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQSQKAK |
Gnb2l1-prov protein | G2 | 317 | Mucilaginibacter Paludis Dsm 18603 | MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSSSRDKSVIMWKLTRDETNYGVPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTVQEESHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHSGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDVINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISSSSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVTIGTR |
60S ribosomal protein L35 | H1 | 123 | Mucilaginibacter Paludis Dsm 18603 | MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEEGLRTKKQQRKDRLYSVRKFAVKA |
40S ribosomal protein S7 | H2 | 194 | Mucilaginibacter Paludis Dsm 18603 | MFSTSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGAGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVVFEFPEFQL |
60S ribosomal protein L36 | I1 | 105 | Mucilaginibacter Paludis Dsm 18603 | MAIRYPMAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMRKAAAKKD |
HABP4_PAI-RBP1 domain-containing protein | I2 | 378 | Mucilaginibacter Paludis Dsm 18603 | MRLETMKQTPSSPVNIAMQDSFGCAVENRFQQLLDDESDPLDFLYQSAVEVTHRKKKEEGAAKKNANQKSGKKESQKDRKAVVVGGSTDVKVTQQTGQKRAPKNTEKVTQNENVDSQVKVDRTERRTAFREVRPNIMDRSAEYSIEKPMEIMDQDKQMRNYGGRGGMRGRGRGGFPRNTESDNLRGKREFDRHSGSDRARMRPEDKRGGSGPRNWGSIKEAFSEIEAVPVEEQVETTETEATEEHGKVSEETNDDGFSQEMSLDEWKLLQDQNRSKTELNLRKPETSVPSKAVVIHKSKYKNNISENEEESQYCFRKPVNDITAQLDINFGSLARPSRGRGGGGRGRVRREEAFPHDVINVLADAPNPDDPEDFPALA |
Ribosomal protein L37 | J1 | 97 | Mucilaginibacter Paludis Dsm 18603 | MTKGTSSFGKRRNKTHSLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKVVYRRFKNGFREGTTPKPKRAAVAASSSS |
40S ribosomal protein S9 | J2 | 194 | Mucilaginibacter Paludis Dsm 18603 | MPVARTWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARDLLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDEEEED |
40S ribosomal protein S10 | K2 | 165 | Mucilaginibacter Paludis Dsm 18603 | MLMPKKDRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRSRPETGRPRPKGLEGERPPRLPRGETDRDTYRRSAVPSGADKKAEAGAGAATEFQFRGGFGRGRGQAPQ |
MGC116452 protein | L1 | 51 | Mucilaginibacter Paludis Dsm 18603 | MSSHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL |
40S ribosomal protein S11 | L2 | 158 | Mucilaginibacter Paludis Dsm 18603 | MADIQTERAYQKQPTIFQNKKRVLQGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVRFNVLKVTKAAGAKKQFQKF |
60S ribosomal protein L40 | M1 | 128 | Mucilaginibacter Paludis Dsm 18603 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK |
Rpl41 | N1 | 25 | Mucilaginibacter Paludis Dsm 18603 | MRAKWRKKRMRRLKRKRRKMRQRSK |
40S ribosomal protein S13 | N2 | 151 | Mucilaginibacter Paludis Dsm 18603 | MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTRRVLPPNWKYESSTASALVA |
MGC85428 protein | O1 | 106 | Mucilaginibacter Paludis Dsm 18603 | MVNVPKTRRTYCKKCGRHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVDSNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF |
Rps14 | O2 | 151 | Mucilaginibacter Paludis Dsm 18603 | MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL |
Rpl37a | P1 | 92 | Mucilaginibacter Paludis Dsm 18603 | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGIWHCGSCMKIVAGGAWTYNTTSAVTVKSAIRRLKELKDQ |
40S ribosomal protein S15 | P2 | 145 | Mucilaginibacter Paludis Dsm 18603 | MAEVEQKKKRTFKKFTYRGVDLDQLLDMSYEQVMQLYCARQRRRLNRGLRRKQNSLLKRLRKAKKEAPPMEKPEVIKTHLRDMIILPEMVGSMVGVYNGKAFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK |
Ribosomal_L18e/L15P domain-containing protein | Q1 | 188 | Mucilaginibacter Paludis Dsm 18603 | MGIDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPPLSMSRLIRKMKLQGRENKTAVVVGCITDDVRIHDIPKLKVCALKITSGARSRILKAGGQIMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARGRRASRGYKN |
Rps16 protein | Q2 | 146 | Mucilaginibacter Paludis Dsm 18603 | MPAKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQAISKSLVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR |
60S ribosomal protein L28 | R1 | 137 | Mucilaginibacter Paludis Dsm 18603 | MSAHLQWMVIRNCSSFIVKRNHQVFSTEPNNLKARNSFRYNGLIHKKTVGVQPAADGKGVIVVLKKRAGQRKPATSYEKISINKNSRSTLSSVRHIIRKNNYRKDLRMAALRRASAILKSQKPVVVKKKRTRAAKTA |
40S ribosomal protein S17 | R2 | 135 | Mucilaginibacter Paludis Dsm 18603 | MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQPTVGMNFKTPRGTV |
Death-associated protein-like 1-B | S1 | 113 | Mucilaginibacter Paludis Dsm 18603 | MTKELKVQSSPQALKAGHLPAVKAGGMRVSKKQGNDENSAPEKNAKKTLQEKPSSVLNMTKMQAMNILAGELEKLSHDFPGEAAQIAHQKPRPTVEKIIMPKRLYLIQQPRRC |
40S ribosomal protein S18 | S2 | 152 | Mucilaginibacter Paludis Dsm 18603 | MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIKAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK |
60S ribosomal protein L21 | T1 | 160 | Mucilaginibacter Paludis Dsm 18603 | MTNTRGKRRGTRYMFSRPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTIQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQLRGQILAKRINVRVEHIRHSKSRDSFLQRVKENERKKKEAKEKGIWVELKRQPAQPREAHFVRTGGVEPQLLEPIPYEFMA |
40S ribosomal protein S19 | T2 | 146 | Mucilaginibacter Paludis Dsm 18603 | MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTVRHLYLRGGAGVGSMTKIYGGRQSNGVMPSHFSRGSKSVARKVLQALESLKMVDKDPSGGRKLTPQGQRDLDRIAGQVAAASKKQH |
60S ribosomal protein L22 | U1 | 128 | Mucilaginibacter Paludis Dsm 18603 | MAPVKKTVTKGSKKKKQLLKFTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED |
40S ribosomal protein S20 | U2 | 119 | Mucilaginibacter Paludis Dsm 18603 | MAFKDPGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA |
60S ribosomal protein L23 | V1 | 140 | Mucilaginibacter Paludis Dsm 18603 | MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGGKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSIA |
Eef2-prov protein | V2 | 858 | Mucilaginibacter Paludis Dsm 18603 | MVNFTVDQIRSIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLAFIKQSKDGCGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIRPVLMMNKMDRALLELQLEPEALYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLAPSERCKKVEDMMKKLWGDRYFDPSNGKFSKSAVNADGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKLIEKLDIKLDSEDKDKEGKQLLKSVMRRWLPAGEALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGVKNCDPKGPLMMYISKMVPTTDKGRFYAFGRVFSGVVSTGLKVRIMGPNFTPGKKEDLYIKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQYLVKTGTISTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESSQMCLSKSPNKHNRLFMKARPFPDGLAEDIDKGDVSARQELKTRARYLAEKYEWDVTEARKIWCFGPDGSGPNILTDVTKGVQYLNEIKDSVVAGFQWATKEGVLCEENLRGVRFDVHDVTLHADAIHRGGGQIIPTARRVLYACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNTTRPSQVVAETRKRKGLKEGVSALDNFLDKL |
TRASH domain-containing protein | W1 | 155 | Mucilaginibacter Paludis Dsm 18603 | MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLAEIMAKRNQKPEVRKAQREQAIRAAKEVKKAKQATKKAAPAKAPSKSAPKQKIAKPVKMQAPRVGGKR |
40S ribosomal protein S15a | W2 | 130 | Mucilaginibacter Paludis Dsm 18603 | MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGYIVLTTSAGIMDHEEARRKHTGGKILGFFF |
Ribosomal_L23eN domain-containing protein | X1 | 155 | Mucilaginibacter Paludis Dsm 18603 | MAPKAKKEAVPPKTEAKSKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPTRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVQKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII |
40S ribosomal protein S23 | X2 | 143 | Mucilaginibacter Paludis Dsm 18603 | MGKCRGLRTARKLRNHRREQKWHDKQYKKANLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRAGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS |
KOW domain-containing protein | Y1 | 145 | Mucilaginibacter Paludis Dsm 18603 | MKFSPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYSVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEKMQE |
40S ribosomal protein S24 | Y2 | 132 | Mucilaginibacter Paludis Dsm 18603 | MNDTVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRKERKNRMKKVRGTAKANVGAGKKKD |
60S ribosomal protein L27 | Z1 | 136 | Mucilaginibacter Paludis Dsm 18603 | MGKFMKPGKVVLVLAGRYAGRKAVIVKNVDDGTSDRQYSHALVAGIDRYPRKVTATMGKKRIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKAVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF |
40S ribosomal protein S25 | Z2 | 125 | Mucilaginibacter Paludis Dsm 18603 | MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLNKGLIKLVSKHRAQVIYTRNTKGGDAPAGTEES |
60S ribosomal protein L8 | A1 | 257 | Mucilaginibacter Paludis Dsm 18603 | MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKEN |
40S ribosomal protein SA | A2 | 306 | Mucilaginibacter Paludis Dsm 18603 | MSGGLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKATTKEEFQGEWTAPVAEFPQAEVADWSEGVQVPSVPIQQFPAERPDVQAAPKPAEDWSAQPASTDDWSAAPTAQASEWTGTTTEWS |
Rpl3-prov protein | B1 | 403 | Mucilaginibacter Paludis Dsm 18603 | MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRSLKTIFAEHISDECKRRFYKNWYKSKKKAFTKYCKKWQDEDGKKQLEKDFASMKKYCQVIRVIAHTQMRLLPLRQKKSHLMEIQVNGGTIAEKVDWAREKLEQQVVIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVKNNASTDYDLSDKSINPLGGFVHYGEVKNDFIMLKGCVIGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLKKDRLAKEETA |
40S ribosomal protein S3a-A | B2 | 264 | Mucilaginibacter Paludis Dsm 18603 | MAVGKNKRLTKGGKKGAKKKIVDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMFEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVERADGYEPPVQESV |
60S ribosomal protein L38 | K1 | 70 | Mucilaginibacter Paludis Dsm 18603 | MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGLSVKELK |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
18S rRNA | 22 | 1826 | NA | UACCUGGUUGAUCCUGCCAGUAGCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCACGUGUAAGUACGCACGGCCGGUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUGGUUCCUUUGAUCGCUCCAUCUGUUACUUGGAUAACUGUGGUAAUUCUAGAGCUAAUACAUGCCGACGAGCGCUGACCCCCAGGGAUGCGUGCAUUUAUCAGACCAAAACCAAUCCGGGGCCCCCGCGCCCCGGCCGCUUUGGUGACUCUAGAUAACCUCGGGCCGAUCGCACGCCCCCGUGACGGCGACGAUACAUUCGGAUGUCUGCCCUAUCAACUUUCGAUGGUACUUUCUGCGCCUACCAUGGUGACCACGGGUAACGGGGAAUCAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUACCCACUCCCGACGCGGGGAGGUAGUGACGAAAAAUAACAAUACAGGACUCUUUCGAGGCCCUGUAAUUGGAAUGAGUACACUUUAAAUCCUUUAACGAGGAUCUAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUAUAUUAAAGUUGCUGCAGUUAAAAAGCUCGUAGUUGGAUCUUGGGAUCGAGCUGGCGGUCCGCCGCGAGGCGAGCUACCGCCUGUCCCAGCCCCUGCCUCUCGGCGCCUCCCCGAUGCUCUUGACUGAGUGUCCCGGGGGCCCGAAGCGUUUACUUUGAAAAAAUUAGAGUGUUCCAAGCAGGCCGCGUCGCCUGGAUACUUCAGCUAGGAAUAAUGGAAUAGGACUCCGGUUCUAUUUUGUUGGUUUUCGGAACUGGGGCCAUGAUUAAGAGGGACGGCCGGGGGCAUUCGUAUUGUGCCGCUAGAGGUGAAAUUCUUGGACCGGCGCAAGACGAACCAAAGCGAAAGCAUUUGCCAAGAAUGUUUUCAUUAAUCAAGAACGAAAGUCGGAGGUUCGAAGACGAUCAGAUACCGUCGUAGUUCCGACCAUAAACGAUGCCGACUAGCGAUCCGGCGGCGUUAUUCCCAUGACCCGCCGAGCAGCUUCCGGGAAACCAAAGUCUUUGGGUUCCGGGGGGAGUAUGGUUGCAAAGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGAAACCUCACCCGGCCCGGACACGGAAAGGAUUGACAGAUUGAUAGCUCUUUCUCGAUUCUGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGCGAUUUGUCUGGUUAAUUCCGAUAACGAACGAGACUCCUCCAUGCUAACUAGUUACGCGACCCCCGGCGGUCGGCGUCCAACUUCUUAGAGGGACAAGUGGCGUUCAGCCACACGAGAUCGAGCAAUAACAGGUCUGUGAUGCCCUUAGAUGUCCGGGGCUGCACGCGCGCUACACUGAACGGAUCAGCGUGUGUCUACCCUGCGCCGACAGGUGCGGGUAACCCGCUGAACCCCGUUCGUGAUAGGGAUCGGGGAUUGCAAUUAUUUCCCAUGAACGAGGAAUUCCCAGUAAGUGCGGGUCAUAAGCUCGCGUUGAUUAAGUCCCUGCCCUUUGUACACACCGCCCGUCGCUACUACCGAUUGGAUGGUUUAGUGAGGUCCUCGGAUCGGCCCCGCCGGGGUCGGCCACGGCCCUGGCGGAGCGCCGAGAAGACGAUCAAACUUGACUAUCUAGAGGAAGUAAAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUA |
28S rRNA | 51 | 4115 | NA | UCAGACCUCAGAUCAGACGCGGCGACCCGCUGAAUUUAAGCAUAUUACUAAGCGGAGGAAAAGAAACUAACCAGGAUUCCCCCAGUAACGGCGAGUGAAGAGGGAAGAGCCCAGCGCCGAAUCCCCGCCCGCCCGGCGGGCGCGGGACGUGUGGCGUACGGGAGACCGGACCCCCCCGGCGCGGCUCGGGGGCCCAAGUCCUUCUGAUCGAGGCCCAGCCCGCGGACGGUGUUAGGCCGGUGGCGGCCCCCGGCGCGGCGGGACCCGGUCUCCUCGGAGUCGGGUUGUUUGGGAAUGCAGCCCAAAGCGGGUGGUAAACUCCAUCUAAGGCUAAAUACCGGCACGAGACCGAUAGCGGACAAGUACCGUAAGGGAAAGUUGAAAAGAACUUUGAAGAGAGAGUUCAAGAGGGCGUGAAACCGUUAAGAGGUAAACGGGUGGGGUCCGUGCGGUCCGCCCGGAGGAUUCAACCCGGCGGGUCAGCGCCGGCCGGACCGGGCCACUCGGCGGACCCCCCCGCCGGCCCCCUCCCCUCGCCGGGAGGGCGGUCGCGCGGGGGGGACGCGGCCCGGGCGGCCCCGGCGCCCGCAGGGCGCAUUUCCUCCGCGGCGGUGCGCCGCGACCGGCUCCGGGCCGGCUGGGAAGGCCCAGGGGUUCAGGGGAAGGUGGCCGGCCGCCCCCGCGCGGCCGGCGUUACAGCCCCCCCCCAGGCAGCAGCACUCGCCGUCGCCCGGGGCCGAGGGAGACGACCGCCUCCGCGGCCUCCUCCCCGGAACCGUCCCGUCCCGCUCCCCCCCGGGGGGGCGGGCCGCGGGGCGGGGAAGGGGGAAGGGGCCCCCCGCUCCCGGCGCGGCUGUCAACCGGGGCGGACUGCCCCCAGUGCGCCCCGUCCGCGCCGCGCCGCCGAGGCGGGAGGGCCCGCGGGAGCCGCCAGGGGUCCGCGGCGAUGUCGGUGUCCCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUAACGCGCGCGCGAGUCGGAGGGACUCUGCGCGAAACCCUGUGGCGCAAUGAAGGUGAGGGCCGGGGCGCCCCGGCUGAGGUGGGAUCCCGCCGCCCCUCCCUCCGCCCCCCCGGGGGCGGGGGGGGGCGCCGGCGGGCGCACCACCGGCCCGUCUCGCCCGCCCCGUCGGGGAGGUGGAGCGUGAGCGCGCGCGAUAGGACCCGAAAGAUGGUGAACUAUGCCUGGGCAGGGCGAAGCCAGAGGAAACUCUGGUGGAGGUCCGUAGCGGUCCUGACGUGCAAAUCGGUCGUCCGACCUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUCUAGUAGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCGCUCGUCCGUCGCAGUUUUAUCCGGUAAAGCGAAUGAUUAGAGGUCUUGGGGCCGAAACGAUCUCAACCUAUUCUCAAACUUUAAAUGGGUAAGAAGCCCGGCUCGCUGGCUUGGAGCCGGGCGUGGAAUGCGAGCACGCCUAGUGGGCCACUUUUGGUAAGCAGAACUGGCGCUGCGGGAUGAACCGAACGCCGGGUUAAGGCGCCCGAUGCCGACGCUCAUCAGACCCCAGAAAAGGUGUUGGUUGAUAUAGACAGCAGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUGUGUAACAACUCACCUGCCGAAUCAACUAGCCCUGAAAAUGGAUGGCGCUGGAGCGUCGGGCCCAUACCCGGCCGUCGCCGGCGCUGGGUCAGUCCGCGGGGGCUAGGCCGCGACGAGUAGGAGGGCCGCCGCGGUGGGCGCGGAAGCCCCGGGCGAGGGCCCGGGUGGAGCCGCCGCGGGUGCAGAUCUUGGUGGUAGUAGCAAAUAUUCAAACGAGAACUUUGAAGGCCGAAGUGGAGAAGGGUUCCAUGUGAACAGCAGUUGAACAUGGGUCAGUCGGUCCUAAGAGAUGGGCGAGCGCCGUUCGGAAGGGACGGGCGAUGGCCUCCGUCGCCCUCGGCCGAUCGAAAGGGAGUCGGGUUCAGAUCCCCGAACCCGGAGUGGCGGAGACGGGCGCCCGCGGCCCCCCCCGACGCCUCGCGGCGGCGGGGGGGCGGGGGCGUCCAGUGCGGCGACGCGACCGAUCCCGGAGAAGCCGGCGGGAGCCCCGGGGAGAGUUCUCUUUUCUUUGUGAAGGGCAGGGCCGCCCUGGAAUGGGUUCGCCCCGAGAGAGGGGCCCGCGCCUUGGAAAGCGUCGCGGUUCCGGCGGCGUCCGGUGAGCUCUCGCUGGCCCUUGAAAAUCCGGGGGAGAGGGUGUAAAUCUCGCGCCGGGCCGUACCCAUAUCCGCAGCAGGUCUCCAAGGUGAACAGCCUCUGGCAUGUUAGAACAAUGUAGGUAAGGGAAGUCGGCAAGUCAGAUCCGUAACUUCGGGAUAAGGAUUGGCUCUAAGGGCUGGGUCGGUCGGGCUGGGGCGCGAAGCGGGGCUGGGCACGCGCCGCGGCUGGACGAGGCGCCCCGGCGGCCUCCCUCCUCCCGCCCCCCUCUCUCUCCGGCCCCCCCUCGCGGGGGGCCGCGGGGGCGGGGGGGCGCGGGGGGCCGGGAGCCGCCCGCCGGCGGCGGCGACUCUGGACGCGCGCCGGGCCCUUCCUGUGGAUCGCCCCAGCUGCGGCGCGCGCCUCUCCCCCGCGCCGUCCCCCUCCGCGCCUCCCCCCGUCAGGGGACGGGGCGCGGGCGGCGGGGCGGCCGGGGCGGGGCGCGCGGCCUCGGCCGGCGCCUAGCAGCUGACUUAGAACUGGUGCGGACCAGGGGAAUCCGACUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCGAGGCGGGUGUUGACGCGAUGUGAUUUCUGCCCAGUGCUCUGAAUGUCAAAGUGAAGAAAUUCAAUGAAGCGCGGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGAUGAACGAGAUUCCCACUGUCCCUACCUACUAUCUAGCGAAACCACAGCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGACCCUGUUGAGCUUGACUCUAGUCUGCAACUGUGAAGAGACAUGAGAGGUGUAGGAUAAGUGGGAGGCCCCCGCGCUCGUCGCAAAGGGGCGCCGCCGGUGAAAUACCACUACUCUUAUCGUUUUUUCACUUACCCGGUGAGGCGGGGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGACCCAAGCGCCCGGCCCCCGCGCCGGGCGCGACCCGCUCCGAGGACAGUGGCAGGUGGGGAGUUUGACUGGGGCGGUACACCUGUCAAACCGUAACGCAGGUGUCCUAAGGCGAGCUCAGGGAGGACAGAAACCUCCCGUGGAGCAGAAGGGCAAAAGCUCGCUUGAUCUUGAUUUUCAGUAUGAAUACAGACCGUGAAAGCGGGGCCUCACGAUCCUUCUGACUUUUUGGGUUUUAAGCAGGAGGUGUCAGAAAAGUUACCACAGGGAUAACUGGCUUGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCUAUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGAUGUGUUGUCGCAAUAGUAAUCCUGCUCAGUACGAGAGGAACCGCAGGUUCAGACAUUUGGUGUAUGUGCUUGGCUGAGGAGCCAAUGGGGCGAAGCUACCAUCUGUGGGAUUAUGACUGAACGCCUCUAAGUCAGAAUCCCCCCUAAACGUGACGAUACCGCAGCGCCGCGGAGCCUCGGUCGGCCUCGGAUAGCCGGCGCCCCCCCCGGGGGGCGCCGGCGGGCAGAGCCGCUCGCCUCGGGACCGGAGCGCGGACGAAAGGGGGCCGCCUCUCUCCCGGAGCGCACCGCACGUUCGUGGGGAACCUGGUGCUAAAUCAUUCGUAGACGACCUGAUUCUGGGUCAGGGUUUCGUGCGUAGCAGAGCAGCUACCUCGCUGCGAUCUAUUGAAAGUCAUCCCUUGAGCCAAGCUUUUGUC |
5S rRNA | 71 | 120 | NA | GCCUACGGCCACACCACCCUGAAAGUGCCUGAUCUCGUCUGAUCUCAGAAGCGAUACAGGGUCGGGCCUGGUUAGUACCUGGAUGGGAGACCGCCUGGGAAUACCAGGUGUCGUAGGCUU |
5.8S rRNA | 81 | 156 | NA | GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAGUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACCUUGCGGCCCCGGGUUCCUCCCGGGGCCACGCCUGUCUGAGGGUCGCU |
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-06-24 Deposition Author(s): Belacic, K. , Grishkovskaya, I. , Haselbach, D. , Kandolf, S. , Leesch, F. , Lorenzo-Orts, L. , Meinhart, A. , Pauli, A.