PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7OKN

Structure of the outer-membrane core complex (inner ring) from a conjugative type iv secretion system

PDB DOI: 10.2210/pdb7okn/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Methylomicrobium Album Bg8

Deposited: 2021-05-18
Deposition Author(s): Amin, H. , Costa, T.R.D. , Ilangovan, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.34 Å

7okn
Literature

Structure of the outer-membrane core complex (inner ring) from a conjugative type iv secretion system

Amin, H. , Costa, T.R.D. , Ilangovan, A.

Primary Citation of Related Structures: 7OKN


Proteins
Molecule Chains Sequence Length Organism Sequence
TraB A 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB C 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB E 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB G 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB I 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB K 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB M 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB O 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB Q 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB S 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB U 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB W 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
TraB Y 461 Methylomicrobium Album Bg8 MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKGSQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPAGGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFVEAIVVEGADANASVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKLGDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVGVGATASMSAADIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPATGQVVTQWSHPQFEK
Type IV conjugative transfer system lipoprotein TraV B 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV D 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV F 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV H 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV J 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV L 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV N 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV P 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV R 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV T 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV V 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV X 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Type IV conjugative transfer system lipoprotein TraV Z 204 Methylomicrobium Album Bg8 MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQLARDKAAKQAGKPAAGGLPSLVNLPATSAVEVPSASRSAVTPPSGTRTVSTTPPVSAGTSAGVNTNTTTSTLTPRPVAGTPVTTTPSSVAYRPVVSVVTPTPSCQNVRCDNPGTVHPQRSRDQIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPARVN
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-05-18
Deposition Author(s): Amin, H. , Costa, T.R.D. , Ilangovan, A.