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FASTA Sequence PDB Format mmCIF Format
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7OHA

Nucleosome with tbp and tfiia bound at shl +2

PDB DOI: 10.2210/pdb7oha/pdb

Classification: TRANSCRIPTION
Organism(s): Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603

Deposited: 2021-05-09
Deposition Author(s): Cramer, P. , Wang, H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

7oha
Literature

Nucleosome with tbp and tfiia bound at shl +2

Cramer, P. , Wang, H.

Primary Citation of Related Structures: 7OHA


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 135 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.2 E 135 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 102 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 102 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A C 129 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSAKSK
Histone H2A G 129 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSAKSK
Histone H2B 1.1 D 122 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B 1.1 H 122 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
TATA-binding protein K 240 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 MADEERLKEFKEANKIVFDPNTRQVWENQNRDGTKPATTFQSEEDIKRAAPESEKDTSATSGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM
Transcription initiation factor IIA large subunit L 171 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQFNEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGSALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEWV
Transcription initiation factor IIA subunit 2 M 122 Grouper Iridovirus , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 MAVPGYYELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVKGNLDTYGFCDDVWTFIVKNCQVTVEDSHRDASQNGSGDSQSVISVDKLRIVACNSKKSE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (122-MER) i 145 NA ATCAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCGAT
DNA (122-MER) j 145 NA ATCGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-05-09
Deposition Author(s): Cramer, P. , Wang, H.