7ODF
Structure of the mini-rna-guided endonuclease crispr-cas_phi3
PDB DOI: 10.2210/pdb7odf/pdb
Classification: RNA BINDING PROTEIN Organism(s): Carcinoscorpius Rotundicauda , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2021-04-29 Deposition Author(s): Carabias Del Rey, A. , Erledsson, S. , Fugilsang, A. , Montoya, G. , Pape, T. , Sofos, N. , Stella, S. , Temperini, P.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.66 Å
Structure of the mini-rna-guided endonuclease crispr-cas_phi3
Carabias Del Rey, A. , Erledsson, S. , Fugilsang, A. , Montoya, G. , Pape, T. , Sofos, N. , Stella, S. , Temperini, P.
Primary Citation of Related Structures: 7ODF
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Cas_phi3 | A | 766 | Carcinoscorpius Rotundicauda , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MEKEITELTKIRREFPNKKFSSTDMKKAGKLLKAEGPDAVRDFLNSCQEIIGDFKPPVKTNIVSISRPFEEWPVSMVGRAIQEYYFSLTKEELESVHPGTSSEDHKSFFNITGLSNYNYTSVQGLNLIFKNAKAIYDGTLVKANNKNKKLEKKFNEINHKRSLEGLPIITPDFEEPFDENGHLNNPPGINRNIYGYQGCAAKVFVPSKHKMVSLPKEYEGYNRDPNLSLAGFRNRLEIPEGEPGHVPWFQRMDIPEGQIGHVNKIQRFNFVHGKNSGKVKFSDKTGRVKRYHHSKYKDATKPYKFLEESKKVSALDSILAIITIGDDWVVFDIRGLYRNVFYRELAQKGLTAVQLLDLFTGDPVIDPKKGVVTFSYKEGVVPVFSQKIVPRFKSRDTLEKLTSQGPVALLSVDLGQNEPVAARVCSLKNINDKITLDNSCRISFLDDYKKQIKDYRDSLDELEIKIRLEAINSLETNQQVEIRDLDVFSADRAKANTVDMFDIDPNLISWDSMSDARVSTQISDLYLKNGGDESRVYFEINNKRIKRSDYNISQLVRPKLSDSTRKNLNDSIWKLKRTSEEYLKLSKRKLELSRAVVNYTIRQSKLLSGINDIVIILEDLDVKKKFNGRGIRDIGWDNFFSSRKENRWFIPAFHKAFSELSSNRGLCVIEVNPAWTSATCPDCGFCSKENRDGINFTCRKCGVSYHADIDVATLNIARVAVLGKPMSGPADRERLGDTKKPRVARSRKTMKRKDISNSTVEAMVTA |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*GP*TP*AP*TP*CP*CP*CP*AP*TP*TP*AP*CP*CP*AP*GP*CP*TP*GP*AP*AP*TP*TP*AP*C)-3') | e | 24 | NA | GTATCCCATTACCAGCTGAATTAC |
| DNA (5'-D(P*GP*TP*AP*AP*TP*TP*CP*AP*G)-3') | g | 9 | NA | GTAATTCAG |
| DNA (5'-D(P*GP*G)-3') | c | 2 | NA | GG |
| RNA (43-MER) | f | 43 | NA | AUUGAUUGCCCAGUACGCUGGGACAGCUGGUAAUGGGAUACCU |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-04-29 Deposition Author(s): Carabias Del Rey, A. , Erledsson, S. , Fugilsang, A. , Montoya, G. , Pape, T. , Sofos, N. , Stella, S. , Temperini, P.