Cryo-em structure (model_2a) of the rc-dlh complex from gemmatimonas phototrophica at 2.5 a
PDB DOI: 10.2210/pdb7o0v/pdb
Classification: MEMBRANE PROTEIN Organism(s): Gemmatimonas Phototrophica
Deposited: 2021-03-27 Deposition Author(s): Koblizek, M. , Qian, P.
Method: ELECTRON MICROSCOPY Resolution: 2.5 Å
Cryo-em structure (model_2a) of the rc-dlh complex from gemmatimonas phototrophica at 2.5 a
Primary Citation of Related Structures: 7O0V
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
LHC domain-containing protein | AA | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AB | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AE | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AF | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AG | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AH | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AI | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AJ | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AK | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AL | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AM | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AN | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AO | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHC domain-containing protein | AP | 71 | Gemmatimonas Phototrophica | MHRIWLMYDPRRVMVALVGFLAVLALVIHFVLLSSQRYSWIENGTLGADQAPVGASAPAAAAEMSPLPPGR |
LHh-alpha | AQ | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAATR |
LHh-alpha | AR | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAATR |
LHh-alpha | AS | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAATR |
LHh-alpha | AT | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAATR |
LHh-alpha | AU | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAATR |
LHh-alpha | AV | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAATR |
LHh-alpha | AW | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAATR |
LHh-alpha | AX | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAATR |
RC-M | M | 367 | Gemmatimonas Phototrophica | MLEYQNLFTRVQVRTVPEPGIPIDESTGTRYGTGTFSYLAGKFGDAQIGPIYLGWAGVLSLIFGFIAIEIIGLNMWASVGWDPVEFIRQLPWLALEPPPPQYGLRVPPLNQGGWYLMAGFFLTVSIILWWIRIYRRARALQMGSHLPWAFASAIFLYSTFFFQPLLVGSWSEMVPFGIFPHLDWTSAFSIRYGNLYYNPFHALSIAFLYGSAVLFAMHGATILAVARMGGEREIEQITDRGTAAERSMLFWRWCMGFNATMESIHRWAWWFAVLTTFTGGIGILLTGTVVDNWYLWGVKHGLVAPYPAQNQLTPEQQDLLRGRYQGTAPDSFPSYVVPQNATMPDTAAAPIVTDSITTDSTKTGGTQ |
LHh-alpha | AC | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAART |
LHh-alpha | AD | 54 | Gemmatimonas Phototrophica | MHRIWMGTDPHIIMSALGSFLVGAVLVMHIWAYGQFNWPATLKAKYATPPAART |
Light-harvesting protein B:885 subunit beta | BA | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BC | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BF | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BG | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BH | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BJ | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BK | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BL | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BM | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BN | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BO | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BP | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BU | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BX | 44 | Gemmatimonas Phototrophica | MSEKGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BB | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BD | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BE | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BI | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BQ | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BR | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BS | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BT | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BV | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
Light-harvesting protein B:885 subunit beta | BW | 43 | Gemmatimonas Phototrophica | MSEGGMTEEEARRFHGYMVTGTLGYVVVASVAHFLAWSWRPWF |
MULTIHEME_CYTC domain-containing protein | C | 354 | Gemmatimonas Phototrophica | MVPVSLLTLGACGDAATDTVQVGYRGTAMEQNYDHGDLKTKFAQVKLPQSPPPAGESPPGPLPWKNVQVLNDISIAEFNRTMIAMSTWVAGTGNCAYCHNVAAFQDDTLPNGKPLYTKIVARRMLQMTRNINGNYSQHVKNTGVTCYTCHMGKPLPNGLWFYSSQTDYLRHYLDRDGARVITQGVAPSNANRSSTKQAEWTYALMISQSRSLGVNCTYCHNTRQFASWREAPPARVTAYHGILMLRDVNQNYLAPLQPVYPAVRLGAMGDAPKAQCVTCHNGAYKPLYGAQMAKDFPAMWGRADWNGVPFPGIMRVAADSTKTDSTVVAAPAAAPAQRTSARPGSVTTPVGGVN |
RC-S | C1 | 202 | Gemmatimonas Phototrophica | MPASPSPLPRSSRVRNAAVVVALVAVGLAARGRDAQGTQPPVAPPAAPTATAAPDLAVQDSTKADSTAVADTLMDLSMVMAAEAAAATVTTAPVAVAPTAWPVDPTTGQTLINGRPVVGRVFIMRKTDGTVKYPNVADVVAHEALAPLPPVVGSSYQQAPITNQRRMRGIMIQSTLWDMDRKRSATRQRYYPASTPANQLGQ |
PRCH domain-containing protein | H1 | 67 | Gemmatimonas Phototrophica | MMEYIDGAQIALYAFWLFFFGLIIYLRREDKREGYPLESPQGPRDGWPKGAPKKTYVHRDHGGEGTH |
RC-Hc | H2 | 181 | Gemmatimonas Phototrophica | MSDVKFVPADNYNGSPIIPTGNPMIDGVGPASWAEDRRDEPDLTYHGSHKIVPMRLDPTFSIAKGDPDPRGLPVIAADKQVAGTVVELWVNRSEPQVSYYEVQLASGERRVLLPTGYVQWPNFGLWGNDKLLVKSITAAQFANVPATKRDDQITLLEEDKICAYYAGGHMYAFAERSQPII |
Photosynthetic reaction center L subunit | L | 274 | Gemmatimonas Phototrophica | MAMLSFEKKYRVRGGTLIGGDLFDFWFGPFYVGFFGVTTIFFVTLGTLLCVWGAAMGPTWNLWQINIAPPDLKYGLGLAPLREGGLWQIITLCALGAFGSWALRQAEIARKLGMGMHIPWAYGGAILAYTTLVVIRPFLLGAWGHGFPYGIFSHLDWVSNVGYQYLHFHYNPAHMIAVTFFFTNCLALAMHGSLILSVTNPPKGTPTGTSEQENVFFRDLLGYSIGAIGIHRLGLFLAVGAAVWSAICIVISGPFWTQGWPEWWNWWLNLPIWK |
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-03-27 Deposition Author(s): Koblizek, M. , Qian, P.