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FASTA Sequence PDB Format mmCIF Format
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7NJ3

1918 h1n1 viral influenza polymerase heterotrimer with nb8196 core

PDB DOI: 10.2210/pdb7nj3/pdb

Classification: VIRAL PROTEIN
Organism(s): Camelidae Mixed Library , Influenza A Virus (Strain A/Brevig Mission/1/1918 H1N1) , Staphylococcus Aureus , Synthetic Construct

Deposited: 2021-02-15
Deposition Author(s): Carrique, L. , Fodor, E. , Grimes, J.M. , Keown, J.R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.48 Å

7nj3
Literature

1918 h1n1 viral influenza polymerase heterotrimer with nb8196 core

Carrique, L. , Fodor, E. , Grimes, J.M. , Keown, J.R.

Primary Citation of Related Structures: 7NJ3


Proteins
Molecule Chains Sequence Length Organism Sequence
Polymerase acidic protein A 716 Camelidae Mixed Library , Influenza A Virus (Strain A/Brevig Mission/1/1918 H1N1) , Staphylococcus Aureus , Synthetic Construct MEDFVRQCFNPMIVELAEKAMKEYGEDLKIETNKFAAICTHLEVCFMYSDFHFINERGESIIVESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGAEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEERFEITGTMRRLADQSLPPNFSSLENFRAYVDGFEPNGYIEGKLSQMSKEVNARIEPFLKTTPRPLRLPDGPPCSQRSKFLLMDALKLSIEDPSHEGEGIPLYDAIKCMRTFFGWKEPNVVKPHEKGINPNYLLAWKQVLAELQDIENEEKIPKTKNMKKTSQLKWALGENMAPEKVDFDDCKDVSDLKQYDSDEPELRSLASWIQSEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEVSHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNLYGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRSAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGESPKGVEEGSIGKVCRTLLAKSVFNSLYASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWVLLNASWFNSFLTHALR
RNA-directed RNA polymerase catalytic subunit B 757 Camelidae Mixed Library , Influenza A Virus (Strain A/Brevig Mission/1/1918 H1N1) , Staphylococcus Aureus , Synthetic Construct MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGRWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEMEITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRSYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSFTITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNVLSIAPIMFSNKMARLGKGYMFESKSMKLRTQIPAEMLASIDLKYFNDSTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLGVSILNLGQKRYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLLGINMSKKKSYINRTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLGPATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFEIKKLWEQTRSKAGLLVSDGGPNLYNIRNLHIPEVCLKWELMDEDYQGRLCNPLNPFVSHKEIESVNNAVMMPAHGPAKNMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVSRARIDARIDFESGRIKKEEFAEIMKICSTIEELRRQK
Polymerase basic protein 2,Immunoglobulin G-binding protein A C 905 Camelidae Mixed Library , Influenza A Virus (Strain A/Brevig Mission/1/1918 H1N1) , Staphylococcus Aureus , Synthetic Construct MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPALRMKWMMAMKYPITADKRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNGPTTSAVHYPKIYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQDVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKISPLMVAYMLERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCWEQMYTPGGEVRNDDVDQSLIIAARNIVRRATVSADPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLRISSSFSFGGFTFKRTSGSSVKREEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMIGILPDMTPSTEMSMRGVRVSKMGVDEYSSTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTITYSSSMMWEVNGPESVLVNTYQWIIRNWETVKIQWSQNPTMLYNKMEFEPFQSLVPKAARGQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAAPPKQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKATKRLTVLGKDAGALTEDPDEGTAGVESAVLRGFLILGKEDRRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRMAINENLYFQGELKTAALAQHDEAVDNKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKKLNDAQAPKVDNKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKADPSQSANLLAEAKKLNGAQAPKVDANSAGKST
Nanobody8196 core F 132 Camelidae Mixed Library , Influenza A Virus (Strain A/Brevig Mission/1/1918 H1N1) , Staphylococcus Aureus , Synthetic Construct QVQLQESGGGLVQAGDSLRLSCTTSGSSLSRYGVGWFRQAPGEEREFGASISWNGATYYADSVKGRFTISRDNAKNTVYLQMNSLKAEDTAVYYCAARSDGYLTPYLSPVYWGQGTQVTVSSHHHHHHEPEA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3') e 17 NA GGCCUGCUUUUGCUAUU
RNA (5'-R(P*AP*GP*UP*AP*GP*AP*AP*AP*CP*AP*AP*GP*GP*CP*C)-3') d 15 NA AGUAGAAACAAGGCC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-02-15
Deposition Author(s): Carrique, L. , Fodor, E. , Grimes, J.M. , Keown, J.R.