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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7NHN

Vgal, an antibiotic resistance abcf, in complex with 70s ribosome from listeria monocytogenes

PDB DOI: 10.2210/pdb7nhn/pdb

Classification: RIBOSOME
Organism(s): Escherichia Coli 1-392-07_S4_C3

Deposited: 2021-02-10
Deposition Author(s): Crowe-Mcauliffe, C. , Hauryliuk, V. , Turnbull, K.J. , Wilson, D.N.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

Literature

Vgal, an antibiotic resistance abcf, in complex with 70s ribosome from listeria monocytogenes

Crowe-Mcauliffe, C. , Hauryliuk, V. , Turnbull, K.J. , Wilson, D.N.

Primary Citation of Related Structures: 7NHN


Proteins
Molecule Chains Sequence Length Organism Sequence
Lmo0919 protein 0 567 Escherichia Coli 1-392-07_S4_C3 MSTIEINQLKIEVADRVLVEIPHLLVSKKARIGIIGQNGLGKTTLMEVIAGAKEATSGTVTTQGKLAYIKQLSTDTSTKSGGEKTRKATQHAMRQNPSVLLADQPTSNLDVESVKHLERQWSDFHGALIIISHDRAFLDALCTEIWEIKNQKIHVYKGNYHAYLEQKQQQENQAELAYKEFKNKKKQLQASQTHHEIEAGRIVKPGKRLNNKEASAFKAGKGTQQKKQHSTIKALEKRIERLGNVEKPHTTKPIKIITPDNRVIKKGNTILSAKETAYEIAGRKLFETKAFSIKAGDKVALIGENASGKTTFLKEIIQENPNLLCNPQAKIAYFDQELNGLNQTKSLLENISEISVQTKQVNREVLGSMHFKESDLHKEVRMLSGGERVKLLLSMLLLSDANFLILDQPTNYLDIYAMEALETLIKQFAGTVLFVSHDRTFVNHVAEQLLVIENNEMNFHRMTFAEYEESKAPSRITEEDKLILEMRMSEIAAKLMQPNLKPTEKAILEQDYQEIITKRQQFSGGHHHHHHAKGGENLYFQGVADYKDHDGDYKDHDIDYKDDDDKG
30S ribosomal protein S10 K 102 Escherichia Coli 1-392-07_S4_C3 MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTEKSIYTVLRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL
30S ribosomal protein S12 M 137 Escherichia Coli 1-392-07_S4_C3 MPTINQLVRKPRQSKIKKSTSPALNKGLNSFKRELTDVNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLSNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVENRGQSRSKYGTKKPKK
30S ribosomal protein S13 N 121 Escherichia Coli 1-392-07_S4_C3 MARIAGVDVPREKRIVISLTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREILDRIKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGKKK
30S ribosomal protein S14 type Z O 61 Escherichia Coli 1-392-07_S4_C3 MAKKSMIAKQKRTPKYAVQAYTRCERCGRPHSVIRKFKLCRICFRELAYKGQIPGVKKASW
30S ribosomal protein S15 P 89 Escherichia Coli 1-392-07_S4_C3 MALTQERKNEIIAEYRVHDTDTGSPEVQIAVLTAEINSLNEHVRVHKKDHHSYRGLMKMVGHRRNLLTYLRKKDVQRYRELIKRLGLRR
30S ribosomal protein S16 Q 90 Escherichia Coli 1-392-07_S4_C3 MAVKIRLKRIGSKKKPFYRIVVADSRFPRDGRSIETIGTYNPLLDPVEVKIDEEATLKWMHNGAKPSDTVRNLLSREGIMEKFHNQKLGK
30S ribosomal protein S17 R 87 Escherichia Coli 1-392-07_S4_C3 MADRNQRKVYTGRVVSDKMDKTITVVVETYKKHGLYGKRVKYSKKFKAHDENNIAKTGDVVRISETRPLSATKHFRLLEVVEEAVII
30S ribosomal protein S18 S 79 Escherichia Coli 1-392-07_S4_C3 MAGGRRGGRRRKKVCYFTSNGITHIDYKDVELLKKFVSERGKILPRRVTGTSAKYQRKLTVAIKRSRQMALLPFVAEEK
30S ribosomal protein S19 T 92 Escherichia Coli 1-392-07_S4_C3 MGRSLKKGPFVDDHLMKKVEAAAESEKKQVIKTWSRRSTIFPTFVGQTIAVYDGRKHVPVYVQEDMVGHKLGEFAPTRTYRGHAGDDKKTKR
30S ribosomal protein S20 U 84 Escherichia Coli 1-392-07_S4_C3 MPNIKSAIKRVKTAETRNSRNASQRSAMRTAIKKFDEAAANNADNAKDLYVEASKKLDSAVSKGLIHKNNAARNKSRLAAKLAK
30S ribosomal protein S3 D 218 Escherichia Coli 1-392-07_S4_C3 MGQKVHPIGMRIGVIRDWDSKWYAEKDYADFLHEDLRIRDYVAKRLSDASVSRVEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK
50S ribosomal protein L22 V 118 Escherichia Coli 1-392-07_S4_C3 MASEVTSAKAVAKTVRIAPRKARIVIDLIRGKQVGEAIAILKYTPRSASPIIEKVLKSAIANAEHNYDLDINNLVVEEAFVDEGPTLKRFRPRAQGRASAINKRTSHITVVVSEVKEG
50S ribosomal protein L23 W 94 Escherichia Coli 1-392-07_S4_C3 MDARDIIKRPVVTEESTSILDDKKYTFEVDTRATKTQVKYAVEEIFDVKVAKVNVMNYKGKLKRMGRYAGYTNKRRKAIVTVTADSKEIQFFEV
50S ribosomal protein L24 X 103 Escherichia Coli 1-392-07_S4_C3 MHVKKGDKVKVITGKDKGKSGKVLAAFPKKDRVLIEGINMVKKHTKPSNVNPQGGILNVEAPIHVSNVMLIDPKTGEPTRVGYEVKGDKKVRVAKKSGEVIDK
50S ribosomal protein L27 Z 96 Escherichia Coli 1-392-07_S4_C3 MLKFDIQHFAHKKGGGSTSNGRDSESKRLGAKRADGQFVTGGSILYRQRGTKIYPGTNVGRGGDDTLFAKTDGVVRFERMGRDKKKVSVYPEVQEA
50S ribosomal protein L28 1 62 Escherichia Coli 1-392-07_S4_C3 MAKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVNGKPKKVWVSARALKSGKVERV
50S ribosomal protein L29 2 63 Escherichia Coli 1-392-07_S4_C3 MKANDIRDLSTTEIQDQEKALKEELFNLRFQLATGQLENTARIREVRKAIARMKTIVRERELA
50S ribosomal protein L30 3 59 Escherichia Coli 1-392-07_S4_C3 MAKLEITLKRSLIGRPQPQRKTVQALGLGKTNSVVVKEDNPAIRGMITKVSHLVDVKEV
50S ribosomal protein L32-2 5 57 Escherichia Coli 1-392-07_S4_C3 MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS
50S ribosomal protein L33 1 6 49 Escherichia Coli 1-392-07_S4_C3 MRVNITLECTECGDRNYITTKNKRENPERIELKKYCPRLRRVTLHRETK
50S ribosomal protein L34 7 44 Escherichia Coli 1-392-07_S4_C3 MKRTYQPSKRKRKKVHGFRTRMSTKNGRRVLASRRRKGRKVLSA
50S ribosomal protein L35 8 66 Escherichia Coli 1-392-07_S4_C3 MPKMKTHRGSAKRFKRTGSGKLKRRHGFTSHMFANKSQKQKRKLRKSAMVSAGDFKRIRQMVAKMK
50S ribosomal protein L36 9 37 Escherichia Coli 1-392-07_S4_C3 MKVRPSVKPMCEKCKVIRRKGKVMVICENPKHKQKQG
30S ribosomal protein S2 C 249 Escherichia Coli 1-392-07_S4_C3 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEELTEAEVAPVEEKATEETTEA
30S ribosomal protein S4 E 200 Escherichia Coli 1-392-07_S4_C3 MARYTGPSWKVSRRLGISLSGTGKELERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLRGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSFVPEYVTFDAEKLTGSLNRLPERSELAAEINEAFIVEFYSR
30S ribosomal protein S5 F 167 Escherichia Coli 1-392-07_S4_C3 MPEQIDGNKLDLEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGHVGFGTGKAQEVPDAIRKAVEDAKKNMVLVPTVDTTIPHTVVGHFGGGEILLKPASAGSGVTAGGPVRAVLELAGVADVSSKSLGSNTPINMVRATIDGIKQLKNAEDVAKLRGKTVEELLG
50S ribosomal protein L2 G 277 Escherichia Coli 1-392-07_S4_C3 MAIKKYKPTTNGRRHMTSSDFAEITTSTPEKSLLRPLKKKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADGEKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVLGKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPIGRKSPMSPWGKPTLGYKTRKKNNNSDKFIVRRRKKK
50S ribosomal protein L3 H 209 Escherichia Coli 1-392-07_S4_C3 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAILSNKPEQGHVAKANTTPKRFIREFRDVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNVLLVKGNVPGAKKALVQIKTATKAK
50S ribosomal protein L4 I 207 Escherichia Coli 1-392-07_S4_C3 MPKLSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGESENVELSARNLQGITVIPAESISVLEVAKHDKLIITKAAVEKVEEVLA
50S ribosomal protein L5 J 179 Escherichia Coli 1-392-07_S4_C3 MNRLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVRGMDVVIVTTAKSDEESHELLTQLGMPFQK
30S ribosomal protein S11 L 129 Escherichia Coli 1-392-07_S4_C3 MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVMITDTHGNALAWSSAGSLGFKGSRKSTPFAAQMAAESAAKSAQEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIKDVTPVPHNGCRPPKRRRV
50S ribosomal protein L31 type B 4 81 Escherichia Coli 1-392-07_S4_C3 MKTGIHPEYRPVVFVDTSTDFKFLSGSTKSSSETIKWEDGNEYPLLRVEISSDSHPFYTGKQKHATADGRVDRFNKKYGLK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5S rRNA b 114 NA CUGGUAGUUAUGGCGAGAAGGUCACACCCGUUCCCAUCCCGAACACGGUAGUUAAGCUUCUCUGCGCCAAUGGUAGUUGGGGGCUUCCCCCUGCGAGAGUAGGUCGCUGCCGGG
16S rRNA a 1542 NA GAGAGUUUGAUCCUGGCUCAGGACGAACGCUGGCGGCGUGCCUAAUACAUGCAAGUCGAACGAACGGAGGAAGAGCUUGCUCUUCCAAUGUUAGUGGCGGACGGGUGAGUAACACGUGGGCAACCUGCCUGUAAGUUGGGGAUAACUCCGGGAAACCGGGGCUAAUACCGAAUGAUAAAGUGUGGCGCAUGCCACGCUUUUGAAAGAUGGUUUCGGCUAUCGCUUACAGAUGGGCCCGCGGUGCAUUAGCUAGUUGGUAGGGUAAUGGCCUACCAAGGCAACGAUGCAUAGCCGACCUGAGAGGGUGAUCGGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUAGGGAAUCUUCCGCAAUGGACGAAAGUCUGACGGAGCAACGCCGCGUGUAUGAAGAAGGUUUUCGGAUCGUAAAGUACUGUUGUUAGAGAAGAACAAGGAUAAGAGUAACUGCUUGUCCCUUGACGGUAUCUAACCAGAAAGCCACGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGUGGCAAGCGUUGUCCGGAUUUAUUGGGCGUAAAGCGCGCGCAGGCGGUCUUUUAAGUCUGAUGUGAAAGCCCCCGGCUUAACCGGGGAGGGUCAUUGGAAACUGGAAGACUGGAGUGCAGAAGAGGAGAGUGGAAUUCCACGUGUAGCGGUGAAAUGCGUAGAUAUGUGGAGGAACACCAGUGGCGAAGGCGACUCUCUGGUCUGUAACUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGAGUGCUAAGUGUUAGGGGGUUUCCGCCCCUUAGUGCUGCAGCUAACGCAUUAAGCACUCCGCCUGGGGAGUACGACCGCAAGGUUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGUCUUGACAUCCUUUGACCACUCUGGAGACAGAGCUUUCCCUUCGGGGACAAAGUGACAGGUGGUGCAUGGUUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUGAUUUUAGUUGCCAGCAUUUAGUUGGGCACUCUAAAGUGACUGCCGGUGCAAGCCGGAGGAAGGUGGGGAUGACGUCAAAUCAUCAUGCCCCUUAUGACCUGGGCUACACACGUGCUACAAUGGAUAGUACAAAGGGUCGCGAAGCCGCGAGGUGGAGCUAAUCCCAUAAAACUAUUCUCAGUUCGGAUUGUAGGCUGCAACUCGCCUACAUGAAGCCGGAAUCGCUAGUAAUCGUGGAUCAGCAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCACGAGAGUUUGUAACACCCGAAGUCGGUAGGGUAACCUUUAUGGAGCCAGCCGCCGAAGGUGGGACAGAUAAUUGGGGUGAAGUCGUAACAAGGUAGCCGUAUCGGAAGGUGCGGCUGGAUCACCUCCU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-02-10
Deposition Author(s): Crowe-Mcauliffe, C. , Hauryliuk, V. , Turnbull, K.J. , Wilson, D.N.