Ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions
PDB DOI: 10.2210/pdb7n9u/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Human Immunodeficiency Virus 1 , Lama Glama
Deposited: 2021-06-18 Deposition Author(s): Digianantonio, K.M. , Gerber, E.E. , Smaga, S.S. , Summers, B.J. , Tripler, T.N. , Xiong, Y.
Method: X-RAY DIFFRACTION Resolution: 3.19 Å
Ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions
Digianantonio, K.M. , Gerber, E.E. , Smaga, S.S. , Summers, B.J. , Tripler, T.N. , Xiong, Y.
Primary Citation of Related Structures: 7N9U
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Capsid protein | A | 223 | Human Immunodeficiency Virus 1 , Lama Glama | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGP |
Capsid protein | B | 223 | Human Immunodeficiency Virus 1 , Lama Glama | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGP |
Capsid protein | C | 223 | Human Immunodeficiency Virus 1 , Lama Glama | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGP |
Nanobody | D | 118 | Human Immunodeficiency Virus 1 , Lama Glama | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVSSAA |
Nanobody | E | 118 | Human Immunodeficiency Virus 1 , Lama Glama | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVSSAA |
Nanobody | F | 118 | Human Immunodeficiency Virus 1 , Lama Glama | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVSSAA |
Method: X-RAY DIFFRACTION
Deposited Date: 2021-06-18 Deposition Author(s): Digianantonio, K.M. , Gerber, E.E. , Smaga, S.S. , Summers, B.J. , Tripler, T.N. , Xiong, Y.