7N8O
High-resolution structure of photosystem ii from the mesophilic cyanobacterium, synechocystis sp. pcc 6803
PDB DOI: 10.2210/pdb7n8o/pdb
Classification: PHOTOSYNTHESIS Organism(s): Synechocystis Sp. (Strain Pcc 6803 / Kazusa)
Deposited: 2021-06-15 Deposition Author(s): Brudvig, G.W. , Gisriel, C.J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 1.93 Å
High-resolution structure of photosystem ii from the mesophilic cyanobacterium, synechocystis sp. pcc 6803
Primary Citation of Related Structures: 7N8O
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem II protein D1 2 | A | 360 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MTTTLQQRESASLWEQFCQWVTSTNNRIYVGWFGTLMIPTLLTATTCFIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFLIGIFCYMGRQWELSYRLGMRPWICVAYSAPVSAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEVESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGFNFNQSILDSQGRVIGTWADVLNRANIGFEVMHERNAHNFPLDLASGEQAPVALTAPAVNG |
| Photosystem II reaction center protein K | K | 45 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | METIYLLAKLPEAYQIFDPLVDVLPVIPLFFLALAFVWQAAVGFK |
| Photosystem II reaction center protein L | L | 39 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MDRNSNPNRQPVELNRTSLYLGLLLVAVLGILFSSYFFN |
| Photosystem II reaction center protein M | M | 35 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MQVNNLGFIASILFVLVPTVFLLILFIQTGKQSES |
| Photosystem II manganese-stabilizing polypeptide | O | 247 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | AVDKSQLTYDDIVNTGLANVCPEISSFTRGTIEVEPNTKYFVSDFCMEPQEYFVKEEPVNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDNAVALPSAADKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVDTDV |
| Sll1638 protein | Q | 149 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MSRLRSLLSLILVLVTTVLVSCSSPQVEIPTTYSPEKIAQLQVYVNPIAVARDGMEKRLQGLIADQNWVDTQTYIHGPLGQLRRDMLGLASSLLPKDQDKAKTLAKEVFGHLERLDAAAKDRNGSQAKIQYQEALADFDSFLNLLPQAS |
| Photosystem II protein Y | R | 39 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MDWRVIVVVSPLLIAATWAAINIGAAAIRQLQDVLGREA |
| Photosystem II reaction center protein T | T | 31 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MESVAYILVLTMALAVLFFAIAFREPPRIEK |
| Photosystem II 12 kDa extrinsic protein | U | 131 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MKFISRLLVACSLLIGLMGFLGADLAQALTPNPILAELNAVDAKLTTDFGQKIDLNNSDIRDFRGLRGFYPNLASEIIKNAPYDTVEEVLDIPGLSETQKSRLEANLGSFTVTEPSIELTSGDDRINPGVY |
| Cytochrome c-550 | V | 160 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MKRFFLVAIASVLFFFNTMVGSANAVELTESTRTIPLDEAGGTTTLTARQFTNGQKIFVDTCTQCHLQGKTKTNNNVSLGLADLAGAEPRRDNVLALVEFLKNPKSYDGEDDYSELHPNISRPDIYPEMRNYTEDDIFDVAGYTLIAPKLDERWGGTIYF |
| Photosystem II reaction center X protein | X | 39 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MTPSLANFLWSLVLGAAIVLIPATVGLIFISQKDKITRS |
| Photosystem II CP47 reaction center protein | B | 507 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MGLPWYRVHTVVLNDPGRLISVHLMHTALVAGWAGSMALYELAIFDSSDAVLNPMWRQGMFVLPFMARLGVTSSWNGWSVTGETGLDPGFWSFEGVAAAHIVLSGLLFLAAVWHWVFWDLELFVDPRTGESALDLPKMFGIHLFLSGLLCFGFGAFHLTGVWGPGMWVSDPYGLTGHVQPVAPEWGPAGFNPFNPGGVVAHHIAAGIVGIIAGLFHLTVRPPERLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGNATTPIELFGPTRYQWDKGYFQEEIQRRVDSQLAEGASLSEAWSTIPEKLAFYDYVGNSPAKGGLFRTGAMNSGDGIAQEWIGHPIFKDKEGRELEVRRMPNFFETFPVIMTDADGVVRADIPFRRSESKFSVEQTGVTVSFYGGALDGQTFSNPSDVKKFARKAQLGEGFDFDTETFNSDGVFRTSPRGWFTFGHAVFALLFFFGHIWHGSRTLFRDVFAGVDPGLEEQVEFGVFAKVGDLSTRKEA |
| Photosystem II reaction center protein Ycf12 | Y | 39 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MELLAALNLEPIFQLTFLGLIVLAGPAVVFVLAFRGGDL |
| Photosystem II reaction center protein Z | Z | 62 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MSIVFQIALAALVLFSFVMVVGVPVAYASPQNWDRSKPLLYLGSGIWAILVIVVALLNFLVV |
| Photosystem II CP43 reaction center protein | C | 460 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MVTLSNTSMVGGRDLPSTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFEVAHFIPEKPMYEQGLILLPHIATLGWGVGPAGEVTDIFPFFVVGVLHLISSAVLGLGGIYHALRGPEVLEEYSSFFGYDWKDKNQMTNIIGYHLILLGCGALLLVFKAMFFGGVYDTWAPGGGDVRVITNPTLNPAIIFGYLLKAPFGGEGWIISVNNMEDIIGGHIWIGLICISGGIWHILTKPFGWARRALIWSGEAYLSYSLGALSLMGFIASVFVWFNNTAYPSEFYGPTGMEASQSQAFTFLVRDQRLGANIASAQGPTGLGKYLMRSPSGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLDKLRNDIQPWQVRRAAEYMTHAPLGSLNSVGGVITDVNSFNYVSPRAWLATSHFVLGFFFLVGHLWHAGRARAAAAGFEKGIDRETEPTLFMPDLD |
| Photosystem II D2 protein | D | 352 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MTIAVGRAPVERGWFDVLDDWLKRDRFVFIGWSGLLLFPCAFMALGGWLTGTTFVTSWYTHGLASSYLEGANFLTVAVSSPADAFGHSLLFLWGPEAQGNLTRWFQIGGLWPFVALHGAFGLIGFMLRQFEISRLVGIRPYNAIAFSGPIAVFVSVFLMYPLGQSSWFFAPSFGVAGIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGEDSNTFRAFEPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSSVGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGMRAWMAPQDQPHENFIFPEEVLPRGNAL |
| Cytochrome b559 subunit alpha | E | 81 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MSGTTGERPFSDIVTSIRYWVIHSITIPMLFIAGWLFVSTGLAYDAFGTPRPDEYFTQTRQELPILQERYDINQEIQEFNQ |
| Cytochrome b559 subunit beta | F | 44 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MATQNPNQPVTYPIFTVRWLAVHTLAVPSVFFVGAIAAMQFIQR |
| Photosystem II reaction center protein H | H | 64 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MAQRTRLGDILRPLNSEYGKVVPGWGTTPVMGVFMALFLVFLLIILQIYNSSLILEGFSVDWAG |
| Photosystem II reaction center protein I | I | 38 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MLTLKIAVYIVVGLFISLFIFGFLSSDPTRNPGRKDFE |
| Photosystem II reaction center protein J | J | 39 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) | MFAEGRIPLWVVGVVAGIGAIGVLGLFFYGAYAGLGSSM |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-06-15 Deposition Author(s): Brudvig, G.W. , Gisriel, C.J.