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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7N65

Complex structure of hiv superinfection fab qa013.2 and bg505.sosip.664

PDB DOI: 10.2210/pdb7n65/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2021-06-07
Deposition Author(s): Lee, K.K. , Mangala Prasad, V. , Overbaugh, J.M. , Shipley, M.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.15 Å

7n65
Literature

Complex structure of hiv superinfection fab qa013.2 and bg505.sosip.664

Lee, K.K. , Mangala Prasad, V. , Overbaugh, J.M. , Shipley, M.M.

Primary Citation of Related Structures: 7N65


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp41 A 508 Homo Sapiens , Human Immunodeficiency Virus 1 MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
Envelope glycoprotein gp41 E 508 Homo Sapiens , Human Immunodeficiency Virus 1 MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
Envelope glycoprotein gp41 I 508 Homo Sapiens , Human Immunodeficiency Virus 1 MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
Envelope glycoprotein gp41 B 161 Homo Sapiens , Human Immunodeficiency Virus 1 VGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 F 161 Homo Sapiens , Human Immunodeficiency Virus 1 VGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 J 161 Homo Sapiens , Human Immunodeficiency Virus 1 VGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Fab QA013.2 Heavy Chain, variable region C 128 Homo Sapiens , Human Immunodeficiency Virus 1 DIRIAESGGGLVQPGESLRLACEIIELGFRRAWTTWVRQAPGKGLEWVADINEDGSEKKYGPSVTGRFTISRDNGKNLVFLQMNSLRVEDTATYYCAREAYHLVYDDRIPRGNWFDPWGPGTLVTVSS
Fab QA013.2 Heavy Chain, variable region G 128 Homo Sapiens , Human Immunodeficiency Virus 1 DIRIAESGGGLVQPGESLRLACEIIELGFRRAWTTWVRQAPGKGLEWVADINEDGSEKKYGPSVTGRFTISRDNGKNLVFLQMNSLRVEDTATYYCAREAYHLVYDDRIPRGNWFDPWGPGTLVTVSS
Fab QA013.2 Heavy Chain, variable region K 128 Homo Sapiens , Human Immunodeficiency Virus 1 DIRIAESGGGLVQPGESLRLACEIIELGFRRAWTTWVRQAPGKGLEWVADINEDGSEKKYGPSVTGRFTISRDNGKNLVFLQMNSLRVEDTATYYCAREAYHLVYDDRIPRGNWFDPWGPGTLVTVSS
Fab QA013.2 Light Chain, , variable region D 108 Homo Sapiens , Human Immunodeficiency Virus 1 QSVLTQPPSVSGAPGQRVVISCTGSRSNIGAGYDVHWYQQSPGKVPRIIIYGSNSRSSGVPARFSGSKSGTSASLAITGLQAEDEADYYCQSYDTTLTASVFGGGTKV
Fab QA013.2 Light Chain, , variable region H 108 Homo Sapiens , Human Immunodeficiency Virus 1 QSVLTQPPSVSGAPGQRVVISCTGSRSNIGAGYDVHWYQQSPGKVPRIIIYGSNSRSSGVPARFSGSKSGTSASLAITGLQAEDEADYYCQSYDTTLTASVFGGGTKV
Fab QA013.2 Light Chain, , variable region L 108 Homo Sapiens , Human Immunodeficiency Virus 1 QSVLTQPPSVSGAPGQRVVISCTGSRSNIGAGYDVHWYQQSPGKVPRIIIYGSNSRSSGVPARFSGSKSGTSASLAITGLQAEDEADYYCQSYDTTLTASVFGGGTKV
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-06-07
Deposition Author(s): Lee, K.K. , Mangala Prasad, V. , Overbaugh, J.M. , Shipley, M.M.