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7N2M

Crystal structure of dna polymerase alpha catalytic core in complex with dctp and template/primer having t-c mismatch at the post-insertion site

PDB DOI: 10.2210/pdb7n2m/pdb

Classification: TRANSFERASE/DNA/RNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2021-05-29
Deposition Author(s): Babayeva, N.D. , Baranovskiy, A.G. , Tahirov, T.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

7n2m
Literature

Crystal structure of dna polymerase alpha catalytic core in complex with dctp and template/primer having t-c mismatch at the post-insertion site

Babayeva, N.D. , Baranovskiy, A.G. , Tahirov, T.H.

Primary Citation of Related Structures: 7N2M


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase alpha catalytic subunit A 922 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) DEEQVFHFYWLDAYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKAEAMALKPDLVNVIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFALDKAAPKPPFQSHFCVVSKPKDCIFPYAFKEVIEKKNVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKAPHWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQILKTERVVIPMENIQNMYSESSQLLYLLEHTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKVTEDGEQEQIPELPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVHHYHKDEEN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*GP*CP*CP*UP*GP*GP*AP*GP*CP*GP*C)-3') b 11 NA GCCUGGAGCGC
DNA (5'-D(*AP*T*AP*GP*TP*CP*GP*CP*TP*CP*CP*AP*GP*GP*C)-3') c 15 NA ATAGTCGCTCCAGGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-05-29
Deposition Author(s): Babayeva, N.D. , Baranovskiy, A.G. , Tahirov, T.H.