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FASTA Sequence PDB Format mmCIF Format
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7N28

Cryo-em structure of broadly neutralizing v2-apex-targeting antibody j033 in complex with hiv-1 env

PDB DOI: 10.2210/pdb7n28/pdb

Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2021-05-28
Deposition Author(s): Gao, F. , Zhou, T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.2 Å

7n28
Literature

Cryo-em structure of broadly neutralizing v2-apex-targeting antibody j033 in complex with hiv-1 env

Gao, F. , Zhou, T.

Primary Citation of Related Structures: 7N28


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp120 A 478 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDADTTLFCASDAKAHETEAHNIWATHACVPTDPNPQEIYMENVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLSCTNVTLTNVNYTNNFPNIGNITDEVRNCSFNVTTEIRDKKQKVYALFYKLDIVQMENKNSYRLINCNTSVCKQACPKISFDPIPIHYCTPAGYAILKCNEKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTSVTIGPGQVFYRTGDIIGDIRKAYCEINGTKWNETLKQVVGKLKEHFPNKTISFQPPSGGDLEITMHHFNCRGEFFYCNTTQLFNSTWINSTTIKEYNDTIIYLPCKIKQIINMWQGVGQCMYAPPIRGKINCVSNITGILLTRDGGDANATNDTETFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTKCKRRVVERRRRRR
Envelope glycoprotein gp120 F 478 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDADTTLFCASDAKAHETEAHNIWATHACVPTDPNPQEIYMENVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLSCTNVTLTNVNYTNNFPNIGNITDEVRNCSFNVTTEIRDKKQKVYALFYKLDIVQMENKNSYRLINCNTSVCKQACPKISFDPIPIHYCTPAGYAILKCNEKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTSVTIGPGQVFYRTGDIIGDIRKAYCEINGTKWNETLKQVVGKLKEHFPNKTISFQPPSGGDLEITMHHFNCRGEFFYCNTTQLFNSTWINSTTIKEYNDTIIYLPCKIKQIINMWQGVGQCMYAPPIRGKINCVSNITGILLTRDGGDANATNDTETFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTKCKRRVVERRRRRR
Envelope glycoprotein gp120 G 478 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDADTTLFCASDAKAHETEAHNIWATHACVPTDPNPQEIYMENVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLSCTNVTLTNVNYTNNFPNIGNITDEVRNCSFNVTTEIRDKKQKVYALFYKLDIVQMENKNSYRLINCNTSVCKQACPKISFDPIPIHYCTPAGYAILKCNEKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTSVTIGPGQVFYRTGDIIGDIRKAYCEINGTKWNETLKQVVGKLKEHFPNKTISFQPPSGGDLEITMHHFNCRGEFFYCNTTQLFNSTWINSTTIKEYNDTIIYLPCKIKQIINMWQGVGQCMYAPPIRGKINCVSNITGILLTRDGGDANATNDTETFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTKCKRRVVERRRRRR
3BNC117 antibody heavy chain C 226 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3BNC117 antibody heavy chain J 226 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3BNC117 antibody heavy chain S 226 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3BNC117 antibody light chain D 206 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3BNC117 antibody light chain K 206 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3BNC117 antibody light chain U 206 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
J033 antibody heavy chain X 230 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta QIHLQESGPGLVRPSETLSLTCDVSGGAFNDAYCSWIRRLPGGSLEWIGRISGRDGYVESNPSLTGRVTMSIDATWKKIVLRLTSVTASDTATYFCAGETPEDDFGYYQPYFKSWGQGLLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
J033 antibody light chain Y 214 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta DIQLIQSPSSVSASVGDRVTITCRSTQAIGTDLAWYQATPGTAPKLLIYHSFARHEGVPSRFSAGGSGSEFSLTITGLQPEDFATFFCQHYKRLPLTFGGGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Envelope glycoprotein gp41 M 170 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAMIFGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLPRAPEAQQHLLQLTVWGIKQLQARVLAVERYLEVQKFLGLWGCSGKIICCTAVPWNSTWSNKSFEQIWNNMTWIEWEREISNYTSQIYDILTESQFQQDINEVDLLELDGSAPTKAKRRVVQREKR
Envelope glycoprotein gp41 B 170 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAMIFGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLPRAPEAQQHLLQLTVWGIKQLQARVLAVERYLEVQKFLGLWGCSGKIICCTAVPWNSTWSNKSFEQIWNNMTWIEWEREISNYTSQIYDILTESQFQQDINEVDLLELDGSAPTKAKRRVVQREKR
Envelope glycoprotein gp41 N 170 Homo Sapiens , Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAMIFGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLPRAPEAQQHLLQLTVWGIKQLQARVLAVERYLEVQKFLGLWGCSGKIICCTAVPWNSTWSNKSFEQIWNNMTWIEWEREISNYTSQIYDILTESQFQQDINEVDLLELDGSAPTKAKRRVVQREKR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-05-28
Deposition Author(s): Gao, F. , Zhou, T.