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7MFU

Crystal structure of synthetic nanobody (sb14+sb68) complexes with sars-cov-2 receptor binding domain

PDB DOI: 10.2210/pdb7mfu/pdb

Classification: VIRAL PROTEIN
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct

Deposited: 2021-04-11
Deposition Author(s): Ahmad, J. , Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.7 Å

7mfu
Literature

Crystal structure of synthetic nanobody (sb14+sb68) complexes with sars-cov-2 receptor binding domain

Ahmad, J. , Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.

Primary Citation of Related Structures: 7MFU


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 197 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct ITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPK
Spike protein S1 D 197 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct ITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPK
Synthetic Nanobody #14 (Sb14) B 115 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct QVQLVESGGGLVQAGGSLRLSCAASGFPVQAREMEWYRQAPGKEREWVAAIKSTGTYTAYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVYVGSSYIGQGTQVTVSA
Synthetic Nanobody #14 (Sb14) E 115 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct QVQLVESGGGLVQAGGSLRLSCAASGFPVQAREMEWYRQAPGKEREWVAAIKSTGTYTAYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVYVGSSYIGQGTQVTVSA
Synthetic nanobody #68 (Sb68) C 127 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct SSQVQLVESGGGSVQAGGSLRLSCAASGSISSITYLGWFRQAPGKEREGVAALITVNGHTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAAWGYAWPLHQDDYWYWGQGTQVTVSA
Synthetic nanobody #68 (Sb68) F 127 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct SSQVQLVESGGGSVQAGGSLRLSCAASGSISSITYLGWFRQAPGKEREGVAALITVNGHTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAAWGYAWPLHQDDYWYWGQGTQVTVSA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-04-11
Deposition Author(s): Ahmad, J. , Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.