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7M53
B6 fab fragment bound to the sars-cov/sars-cov-2 spike stem helix peptide
PDB DOI: 10.2210/pdb7m53/pdb
Classification: ANTIVIRAL PROTEIN, IMMUNE SYSTEM Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2021-03-22 Deposition Author(s): Park, Y.J. , Sauer, M.M. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Veesler, D.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.4 Å
B6 fab fragment bound to the sars-cov/sars-cov-2 spike stem helix peptide
Park, Y.J. , Sauer, M.M. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Veesler, D.
Primary Citation of Related Structures: 7M53
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike glycoprotein stem helix peptide | A | 16 | Mus Musculus , Synthetic Construct | DSFKEELDKYFKNHTS |
| B6 antigen-binding (Fab) fragment heavy chain | H | 220 | Mus Musculus , Synthetic Construct | EVQLQQSGPVLVKPGASVRMSCKASGYTITDYYLNWVKQSHGKSLEWLGVLNPYSGGSLYSQTFKGKATLTVDRSSSTAYLELNSLTSEDSAVYYCARQLGRGNGLDYWGQGTSVTVSSVSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK |
| B6 antigen-binding (Fab) fragment light chain | L | 219 | Mus Musculus , Synthetic Construct | NIMMTQSPSSLAVSAGEKVTMSCKSSQSVLHSSDQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYFCHQYLSSYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2021-03-22 Deposition Author(s): Park, Y.J. , Sauer, M.M. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Veesler, D.