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FASTA Sequence PDB Format mmCIF Format
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7LX5

The sars-cov-2 spike protein receptor binding domain bound to neutralizing nanobodies wnb 2 and wnb 10

PDB DOI: 10.2210/pdb7lx5/pdb

Classification: VIRAL PROTEIN
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos

Deposited: 2021-03-03
Deposition Author(s): Glukhova, A. , Pymm, P. , Tham, W.-H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.44 Å

7lx5
Literature

The sars-cov-2 spike protein receptor binding domain bound to neutralizing nanobodies wnb 2 and wnb 10

Glukhova, A. , Pymm, P. , Tham, W.-H.

Primary Citation of Related Structures: 7LX5


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein B 1380 Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos MGGEGLRASPRRRPLLPLQPRGCPRGDGCLRGGRGRAGFGFWRVTGGSSASANHVHAFFFFLQLLGNVLVVVLSHHFGKELRPSQAEFGTATMFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSAWSHPQFEK
WNb 2 C 130 Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos QVQLQESGGGLVQPGGSLRLSCAVSGFTLDYYAIGWFRQAPGKEREGVSCISSSGGNTKYADSVKGRFTASRDNAKNTFYLQMNSLKPEDTAVYYCAAIAATYYSGSYYFQCPHDGMDYWGKGTQVTVSS
WNb 10 A 123 Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos QVQLQESGGGLVQPGGSLRLSCAASGFTFRRYLMGWARQVPGKGLEWVSGIYSDGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAKDRMDGSTWPERDFGSWGQGTQVTVSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-03-03
Deposition Author(s): Glukhova, A. , Pymm, P. , Tham, W.-H.