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FASTA Sequence PDB Format mmCIF Format
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7LUA

Cryo-em structure of dh898.1 fab-dimer bound near the cd4 binding site of hiv-1 env ch848 sosip trimer

PDB DOI: 10.2210/pdb7lua/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus

Deposited: 2021-02-21
Deposition Author(s): Acharya, P. , Edwards, R.J. , Manne, K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.7 Å

7lua
Literature

Cryo-em structure of dh898.1 fab-dimer bound near the cd4 binding site of hiv-1 env ch848 sosip trimer

Acharya, P. , Edwards, R.J. , Manne, K.

Primary Citation of Related Structures: 7LUA


Proteins
Molecule Chains Sequence Length Organism Sequence
CH848 SOSIP gp120 A 466 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus AENLWVTVYYGVPVWKEAKTTLFCASDARAYEKEVHNVWATHACVPTDPSPQELVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLICSNATVKNGTVEEMKNCSFNTTTEIRDKEKKEYALFYKPDIVPLSETNNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNDETFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLHTPVEIVCTRPNNNTRKSVRIGPGQTFYATGDIIGDIKQAHCNISEEKWNDTLQKVGIELQKHFPNKTIKYNQSAGGDMEITTHSFNCGGEFFYCNTSNLFNGTYNGTYISTNSSANSTSTITLQCRIKQIINMWQGVGRCMYAPPIAGNITCRSNITGLLLTRDGGTNSNETETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGR
CH848 SOSIP gp120 C 466 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus AENLWVTVYYGVPVWKEAKTTLFCASDARAYEKEVHNVWATHACVPTDPSPQELVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLICSNATVKNGTVEEMKNCSFNTTTEIRDKEKKEYALFYKPDIVPLSETNNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNDETFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLHTPVEIVCTRPNNNTRKSVRIGPGQTFYATGDIIGDIKQAHCNISEEKWNDTLQKVGIELQKHFPNKTIKYNQSAGGDMEITTHSFNCGGEFFYCNTSNLFNGTYNGTYISTNSSANSTSTITLQCRIKQIINMWQGVGRCMYAPPIAGNITCRSNITGLLLTRDGGTNSNETETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGR
CH848 SOSIP gp120 E 466 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus AENLWVTVYYGVPVWKEAKTTLFCASDARAYEKEVHNVWATHACVPTDPSPQELVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLICSNATVKNGTVEEMKNCSFNTTTEIRDKEKKEYALFYKPDIVPLSETNNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNDETFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLHTPVEIVCTRPNNNTRKSVRIGPGQTFYATGDIIGDIKQAHCNISEEKWNDTLQKVGIELQKHFPNKTIKYNQSAGGDMEITTHSFNCGGEFFYCNTSNLFNGTYNGTYISTNSSANSTSTITLQCRIKQIINMWQGVGRCMYAPPIAGNITCRSNITGLLLTRDGGTNSNETETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGR
Env polyprotein B 146 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus FLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Env polyprotein D 146 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus FLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Env polyprotein F 146 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus FLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
DH898.1 light chain G 218 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus EIVMTQTPLSLSVTPGEPASLSCRSSASLLHGNGNTYLHWYLRKAGQSPQLLIFGGSKRVPGISDRFIGSGAGTNFTLKISSVEADDVGFYYCAQGVAFPWTFGQGTKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFNRGE
DH898.1 light chain J 218 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus EIVMTQTPLSLSVTPGEPASLSCRSSASLLHGNGNTYLHWYLRKAGQSPQLLIFGGSKRVPGISDRFIGSGAGTNFTLKISSVEADDVGFYYCAQGVAFPWTFGQGTKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFNRGE
DH898.1 heavy chain H 219 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus QDLLLQSGAEVREPGASVTVSCQASNYTFPDYYIHWVRLVPGQGLEWLGEMKPKVGVTNVSKKIRDRLFMTADTSTDTAYMVLSALTPGDTAIYYCTRLEPDFLSGWAHWGKGVLVTVSPASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVE
DH898.1 heavy chain I 219 Homo Sapiens , Human Immunodeficiency Virus 1 , Simian-Human Immunodeficiency Virus QDLLLQSGAEVREPGASVTVSCQASNYTFPDYYIHWVRLVPGQGLEWLGEMKPKVGVTNVSKKIRDRLFMTADTSTDTAYMVLSALTPGDTAIYYCTRLEPDFLSGWAHWGKGVLVTVSPASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-02-21
Deposition Author(s): Acharya, P. , Edwards, R.J. , Manne, K.