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FASTA Sequence PDB Format mmCIF Format
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7LPJ

Ape1 mn-bound phosphorothioate substrate complex with abasic ribonucleotide dna

PDB DOI: 10.2210/pdb7lpj/pdb

Classification: LYASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2021-02-11
Deposition Author(s): Freudenthal, B.D. , Hoitsma, N.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.56 Å

7lpj
Literature

Ape1 mn-bound phosphorothioate substrate complex with abasic ribonucleotide dna

Freudenthal, B.D. , Hoitsma, N.M.

Primary Citation of Related Structures: 7LPJ


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA-(apurinic or apyrimidinic site) lyase B 276 Homo Sapiens , Synthetic Construct ALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQAPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
DNA-(apurinic or apyrimidinic site) lyase D 276 Homo Sapiens , Synthetic Construct ALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQAPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') c 21 NA GGATCCGTCGAGCGCATCAGC
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-R(P*(YA4))-D(P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3') e 21 NA GCTGATGCGCXCGACGGATCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-02-11
Deposition Author(s): Freudenthal, B.D. , Hoitsma, N.M.