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7L4Z

Structure of sars-cov-2 spike rbd in complex with cyclic peptide

PDB DOI: 10.2210/pdb7l4z/pdb

Classification: VIRAL PROTEIN
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct

Deposited: 2020-12-21
Deposition Author(s): Christie, M. , Mackay, J.P. , Passioura, T. , Payne, R.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.96 Å

7l4z
Literature

Structure of sars-cov-2 spike rbd in complex with cyclic peptide

Christie, M. , Mackay, J.P. , Passioura, T. , Payne, R.J.

Primary Citation of Related Structures: 7L4Z


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 B 229 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHHH
Spike protein S1 D 229 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHHH
Spike protein S1 A 229 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHHH
Spike protein S1 C 229 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHHH
Spike protein S1 E 229 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHHH
ACE-DTY-LYS-ALA-GLY-VAL-VAL-TYR-GLY-TYR-ASN-ALA-TRP-ILE-ARG-CYS-NH2 S 17 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct XYKAGVVYGYNAWIRCX
ACE-DTY-LYS-ALA-GLY-VAL-VAL-TYR-GLY-TYR-ASN-ALA-TRP-ILE-ARG-CYS-NH2 T 17 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct XYKAGVVYGYNAWIRCX
ACE-DTY-LYS-ALA-GLY-VAL-VAL-TYR-GLY-TYR-ASN-ALA-TRP-ILE-ARG-CYS-NH2 R 17 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct XYKAGVVYGYNAWIRCX
ACE-DTY-LYS-ALA-GLY-VAL-VAL-TYR-GLY-TYR-ASN-ALA-TRP-ILE-ARG-CYS-NH2 U 17 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct XYKAGVVYGYNAWIRCX
ACE-DTY-LYS-ALA-GLY-VAL-VAL-TYR-GLY-TYR-ASN-ALA-TRP-ILE-ARG-CYS-NH2 V 17 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct XYKAGVVYGYNAWIRCX
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-12-21
Deposition Author(s): Christie, M. , Mackay, J.P. , Passioura, T. , Payne, R.J.