PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7KZ0

Human mbd4 glycosylase domain bound to dna containing substrate analog 2'-deoxy-pseudouridine

PDB DOI: 10.2210/pdb7kz0/pdb

Classification: HYDROLASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2020-12-09
Deposition Author(s): Drohat, A.C. , Pidugu, L.S. , Pozharski, E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.57 Å

7kz0
Literature

Human mbd4 glycosylase domain bound to dna containing substrate analog 2'-deoxy-pseudouridine

Drohat, A.C. , Pidugu, L.S. , Pozharski, E.

Primary Citation of Related Structures: 7KZ0


Proteins
Molecule Chains Sequence Length Organism Sequence
Methyl-CpG-binding domain protein 4 A 174 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*CP*AP*GP*CP*GP*(P2U)P*GP*CP*AP*GP*C)-3') c 12 NA CCAGCGUGCAGC
DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3') d 12 NA GCTGCGCGCTGG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-12-09
Deposition Author(s): Drohat, A.C. , Pidugu, L.S. , Pozharski, E.