7KO8
Cryo-em structure of the mature and infective mayaro virus
PDB DOI: 10.2210/pdb7ko8/pdb
Classification: VIRUS Organism(s): Mayaro Virus
Deposited: 2020-11-06 Deposition Author(s): Cassago, A. , Coimbra, L.D. , De Oliveira, P.S.L. , Marques, R.E. , Padilha, A.C.M. , Portugal, R.V. , Riberio-Filho, H.V. , Rocha, R.P.F. , Schatz, M. , Trivella, D.B.B. , Van Heel, M.G.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.4 Å
Cryo-em structure of the mature and infective mayaro virus
Cassago, A. , Coimbra, L.D. , De Oliveira, P.S.L. , Marques, R.E. , Padilha, A.C.M. , Portugal, R.V. , Riberio-Filho, H.V. , Rocha, R.P.F. , Schatz, M. , Trivella, D.B.B. , Van Heel, M.G.
Primary Citation of Related Structures: 7KO8
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Capsid protein | A | 258 | Mayaro Virus | MDFLPTQVFYGRRWRPRMPPRPWRPRPPTIQRPDQQARQMQQLIAAVSTLALRQNAAAPQRGRKKQPRRKKPKPQPEKPKKQEQKPKQKKTPKKKPGRRERMCMKIEHDCIFEVKHEGKVTGYACLVGDKVMKPAHVPGVIDNIDLARLSYKKSSKYDLECAQIPVAMKSDASKYTHEKPEGHYNWHYGAVQYTGGRFTVPTGVGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVVTWNKDMVTKITPEGTEEW |
| Capsid protein | D | 258 | Mayaro Virus | MDFLPTQVFYGRRWRPRMPPRPWRPRPPTIQRPDQQARQMQQLIAAVSTLALRQNAAAPQRGRKKQPRRKKPKPQPEKPKKQEQKPKQKKTPKKKPGRRERMCMKIEHDCIFEVKHEGKVTGYACLVGDKVMKPAHVPGVIDNIDLARLSYKKSSKYDLECAQIPVAMKSDASKYTHEKPEGHYNWHYGAVQYTGGRFTVPTGVGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVVTWNKDMVTKITPEGTEEW |
| Capsid protein | G | 258 | Mayaro Virus | MDFLPTQVFYGRRWRPRMPPRPWRPRPPTIQRPDQQARQMQQLIAAVSTLALRQNAAAPQRGRKKQPRRKKPKPQPEKPKKQEQKPKQKKTPKKKPGRRERMCMKIEHDCIFEVKHEGKVTGYACLVGDKVMKPAHVPGVIDNIDLARLSYKKSSKYDLECAQIPVAMKSDASKYTHEKPEGHYNWHYGAVQYTGGRFTVPTGVGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVVTWNKDMVTKITPEGTEEW |
| Capsid protein | J | 258 | Mayaro Virus | MDFLPTQVFYGRRWRPRMPPRPWRPRPPTIQRPDQQARQMQQLIAAVSTLALRQNAAAPQRGRKKQPRRKKPKPQPEKPKKQEQKPKQKKTPKKKPGRRERMCMKIEHDCIFEVKHEGKVTGYACLVGDKVMKPAHVPGVIDNIDLARLSYKKSSKYDLECAQIPVAMKSDASKYTHEKPEGHYNWHYGAVQYTGGRFTVPTGVGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVVTWNKDMVTKITPEGTEEW |
| E1 glycoprotein | B | 436 | Mayaro Virus | YEHTAVIPNQVGFPYKAHVAREGYSPLTLQMQVVETSLEPTLNLEYITCDYKTKVPSPYVKCCGTAECRTQDKPEYKCAVFTGVYPFMWGGAYCFCDSENTQMSEAYVERADVCKHDYAAAYRAHTASLRAKIKVTYGTVNQTVEAYVNGDHAVTIAGTKFIFGPVSTAWTPFDTKIVVYKGEVYNQDFPPYGAGQPGRFGDIQSRTLDSKDLYANTGLKLARPAAGNIHVPYTQTPSGFKTWQKDRDSPLNAKAPFGCTIQTNPVRAMNCAVGNIPVSMDIADSAFTRLTDAPIISELLCTVSTCTHSSDFGGVAVLSYKVEKAGRCDVHSHSNVAVLQEVSIEAEGRSVIHFSTASAAPSFIVSVCSSRATCTAKCEPPKDHVVTYPANHNGITLPDLSSTAMTWAQHLAGGVGLLIALAVLILVIVTCITLRR |
| E1 glycoprotein | E | 436 | Mayaro Virus | YEHTAVIPNQVGFPYKAHVAREGYSPLTLQMQVVETSLEPTLNLEYITCDYKTKVPSPYVKCCGTAECRTQDKPEYKCAVFTGVYPFMWGGAYCFCDSENTQMSEAYVERADVCKHDYAAAYRAHTASLRAKIKVTYGTVNQTVEAYVNGDHAVTIAGTKFIFGPVSTAWTPFDTKIVVYKGEVYNQDFPPYGAGQPGRFGDIQSRTLDSKDLYANTGLKLARPAAGNIHVPYTQTPSGFKTWQKDRDSPLNAKAPFGCTIQTNPVRAMNCAVGNIPVSMDIADSAFTRLTDAPIISELLCTVSTCTHSSDFGGVAVLSYKVEKAGRCDVHSHSNVAVLQEVSIEAEGRSVIHFSTASAAPSFIVSVCSSRATCTAKCEPPKDHVVTYPANHNGITLPDLSSTAMTWAQHLAGGVGLLIALAVLILVIVTCITLRR |
| E1 glycoprotein | H | 436 | Mayaro Virus | YEHTAVIPNQVGFPYKAHVAREGYSPLTLQMQVVETSLEPTLNLEYITCDYKTKVPSPYVKCCGTAECRTQDKPEYKCAVFTGVYPFMWGGAYCFCDSENTQMSEAYVERADVCKHDYAAAYRAHTASLRAKIKVTYGTVNQTVEAYVNGDHAVTIAGTKFIFGPVSTAWTPFDTKIVVYKGEVYNQDFPPYGAGQPGRFGDIQSRTLDSKDLYANTGLKLARPAAGNIHVPYTQTPSGFKTWQKDRDSPLNAKAPFGCTIQTNPVRAMNCAVGNIPVSMDIADSAFTRLTDAPIISELLCTVSTCTHSSDFGGVAVLSYKVEKAGRCDVHSHSNVAVLQEVSIEAEGRSVIHFSTASAAPSFIVSVCSSRATCTAKCEPPKDHVVTYPANHNGITLPDLSSTAMTWAQHLAGGVGLLIALAVLILVIVTCITLRR |
| E1 glycoprotein | L | 436 | Mayaro Virus | YEHTAVIPNQVGFPYKAHVAREGYSPLTLQMQVVETSLEPTLNLEYITCDYKTKVPSPYVKCCGTAECRTQDKPEYKCAVFTGVYPFMWGGAYCFCDSENTQMSEAYVERADVCKHDYAAAYRAHTASLRAKIKVTYGTVNQTVEAYVNGDHAVTIAGTKFIFGPVSTAWTPFDTKIVVYKGEVYNQDFPPYGAGQPGRFGDIQSRTLDSKDLYANTGLKLARPAAGNIHVPYTQTPSGFKTWQKDRDSPLNAKAPFGCTIQTNPVRAMNCAVGNIPVSMDIADSAFTRLTDAPIISELLCTVSTCTHSSDFGGVAVLSYKVEKAGRCDVHSHSNVAVLQEVSIEAEGRSVIHFSTASAAPSFIVSVCSSRATCTAKCEPPKDHVVTYPANHNGITLPDLSSTAMTWAQHLAGGVGLLIALAVLILVIVTCITLRR |
| E2 glycoprotein | C | 422 | Mayaro Virus | STANHFNAYKLTRPYVAYCADCGMGHSCHSPAMIENVQADATDGTLKIQFASQIGLTKTDTHDHTKIRYAEGHDIAEAARSTLKVHSSSECAVTGTMGHFILAKCPPGEVISVSFVDSKNEQRTCRIAYHHEQRLIGRERFTVRPHHGIELPCTTYQLTTAETSEEIDMHMPPDIPDRTILSQQSGNVKITVNGRTVKYSCSCGSKPSGTTTTDKTINSCTVDKCQAYVTSHTKWQFNSPFVPRAEQAERKGKVHIPFPLINTTCRVPLAPEALVRSGKREATLSLHPIHPTLLSYRTLGREPVFDEQWITTQTEVTIPVPVEGVEYRWGNHKPQRLWSQLTTEGRAHGWPHEIIEYYYGLHPTTTIVVVVAVSVVVLLSVAASVYMCVVARNKCLTPYALTPGAVVPVTIGVLCCAPKAHA |
| E2 glycoprotein | F | 422 | Mayaro Virus | STANHFNAYKLTRPYVAYCADCGMGHSCHSPAMIENVQADATDGTLKIQFASQIGLTKTDTHDHTKIRYAEGHDIAEAARSTLKVHSSSECAVTGTMGHFILAKCPPGEVISVSFVDSKNEQRTCRIAYHHEQRLIGRERFTVRPHHGIELPCTTYQLTTAETSEEIDMHMPPDIPDRTILSQQSGNVKITVNGRTVKYSCSCGSKPSGTTTTDKTINSCTVDKCQAYVTSHTKWQFNSPFVPRAEQAERKGKVHIPFPLINTTCRVPLAPEALVRSGKREATLSLHPIHPTLLSYRTLGREPVFDEQWITTQTEVTIPVPVEGVEYRWGNHKPQRLWSQLTTEGRAHGWPHEIIEYYYGLHPTTTIVVVVAVSVVVLLSVAASVYMCVVARNKCLTPYALTPGAVVPVTIGVLCCAPKAHA |
| E2 glycoprotein | I | 422 | Mayaro Virus | STANHFNAYKLTRPYVAYCADCGMGHSCHSPAMIENVQADATDGTLKIQFASQIGLTKTDTHDHTKIRYAEGHDIAEAARSTLKVHSSSECAVTGTMGHFILAKCPPGEVISVSFVDSKNEQRTCRIAYHHEQRLIGRERFTVRPHHGIELPCTTYQLTTAETSEEIDMHMPPDIPDRTILSQQSGNVKITVNGRTVKYSCSCGSKPSGTTTTDKTINSCTVDKCQAYVTSHTKWQFNSPFVPRAEQAERKGKVHIPFPLINTTCRVPLAPEALVRSGKREATLSLHPIHPTLLSYRTLGREPVFDEQWITTQTEVTIPVPVEGVEYRWGNHKPQRLWSQLTTEGRAHGWPHEIIEYYYGLHPTTTIVVVVAVSVVVLLSVAASVYMCVVARNKCLTPYALTPGAVVPVTIGVLCCAPKAHA |
| E2 glycoprotein | M | 422 | Mayaro Virus | STANHFNAYKLTRPYVAYCADCGMGHSCHSPAMIENVQADATDGTLKIQFASQIGLTKTDTHDHTKIRYAEGHDIAEAARSTLKVHSSSECAVTGTMGHFILAKCPPGEVISVSFVDSKNEQRTCRIAYHHEQRLIGRERFTVRPHHGIELPCTTYQLTTAETSEEIDMHMPPDIPDRTILSQQSGNVKITVNGRTVKYSCSCGSKPSGTTTTDKTINSCTVDKCQAYVTSHTKWQFNSPFVPRAEQAERKGKVHIPFPLINTTCRVPLAPEALVRSGKREATLSLHPIHPTLLSYRTLGREPVFDEQWITTQTEVTIPVPVEGVEYRWGNHKPQRLWSQLTTEGRAHGWPHEIIEYYYGLHPTTTIVVVVAVSVVVLLSVAASVYMCVVARNKCLTPYALTPGAVVPVTIGVLCCAPKAHA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-11-06 Deposition Author(s): Cassago, A. , Coimbra, L.D. , De Oliveira, P.S.L. , Marques, R.E. , Padilha, A.C.M. , Portugal, R.V. , Riberio-Filho, H.V. , Rocha, R.P.F. , Schatz, M. , Trivella, D.B.B. , Van Heel, M.G.