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7KN6

Crystal structure of sars-cov-2 receptor binding domain complexed with nanobody vhh v and antibody fab cc12.3

PDB DOI: 10.2210/pdb7kn6/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos

Deposited: 2020-11-04
Deposition Author(s): Liu, H. , Wilson, I.A. , Wu, N.C. , Yuan, M. , Zhu, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.55 Å

7kn6
Literature

Crystal structure of sars-cov-2 receptor binding domain complexed with nanobody vhh v and antibody fab cc12.3

Liu, H. , Wilson, I.A. , Wu, N.C. , Yuan, M. , Zhu, X.

Primary Citation of Related Structures: 7KN6


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 231 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFSGHHHHHH
VHH V C 135 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos QVQLVETGGGLVQPGGSLRLSCAASGFTFSSYAMGWARQVPGKGLEWVSYIYSDGSTEYQDSVKGRFTISRDNAKSTVYLQMNSLKPEDTAVYYCATEGSLGGWGRDFGSWGQGTQVTVSSGGLPETGGHHHHHH
CC12.3 Fab heavy chain H 220 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
CC12.3 Fab light chain L 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-11-04
Deposition Author(s): Liu, H. , Wilson, I.A. , Wu, N.C. , Yuan, M. , Zhu, X.