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7KN5

Crystal structure of sars-cov-2 receptor binding domain complexed with nanobodies vhh e and u

PDB DOI: 10.2210/pdb7kn5/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Gammaretrovirus , Pyrobaculum Ferrireducens

Deposited: 2020-11-04
Deposition Author(s): Liu, H. , Wilson, I.A. , Wu, N.C. , Yuan, M. , Zhu, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.87 Å

7kn5
Literature

Crystal structure of sars-cov-2 receptor binding domain complexed with nanobodies vhh e and u

Liu, H. , Wilson, I.A. , Wu, N.C. , Yuan, M. , Zhu, X.

Primary Citation of Related Structures: 7KN5


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 231 Gammaretrovirus , Pyrobaculum Ferrireducens RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFSGHHHHHH
Spike protein S1 B 231 Gammaretrovirus , Pyrobaculum Ferrireducens RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFSGHHHHHH
VHH E C 129 Gammaretrovirus , Pyrobaculum Ferrireducens QVQLVETGGGFVQPGGSLRLSCAASGVTLDYYAIGWFRQAPGKEREGVSCIGSSDGRTYYSDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCALTVGTYYSGNYHYTCSDDMDYWGKGTQVTVSS
VHH E D 129 Gammaretrovirus , Pyrobaculum Ferrireducens QVQLVETGGGFVQPGGSLRLSCAASGVTLDYYAIGWFRQAPGKEREGVSCIGSSDGRTYYSDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCALTVGTYYSGNYHYTCSDDMDYWGKGTQVTVSS
VHH U E 126 Gammaretrovirus , Pyrobaculum Ferrireducens QVQLVESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGSTHFADSVKGRFTISRDNAKNTVYLQMNSLIPEDTAVYYCAAQSGSYYWCGSDWHEYEYWGQGTQVTVSS
VHH U F 126 Gammaretrovirus , Pyrobaculum Ferrireducens QVQLVESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGSTHFADSVKGRFTISRDNAKNTVYLQMNSLIPEDTAVYYCAAQSGSYYWCGSDWHEYEYWGQGTQVTVSS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-11-04
Deposition Author(s): Liu, H. , Wilson, I.A. , Wu, N.C. , Yuan, M. , Zhu, X.