7KLW
Crystal structure of synthetic nanobody (sb45+sb68) complexes with sars-cov-2 receptor binding domain
PDB DOI: 10.2210/pdb7klw/pdb
Classification: VIRAL PROTEIN Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct
Deposited: 2020-11-01 Deposition Author(s): Ahmad, J. , Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.6 Å
Crystal structure of synthetic nanobody (sb45+sb68) complexes with sars-cov-2 receptor binding domain
Ahmad, J. , Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.
Primary Citation of Related Structures: 7KLW
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike protein S1 | A | 194 | Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct | NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP |
| SB45, Synthetic Nanobody | B | 120 | Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct | QVQLVESGGGLVQAGGSLRLSCAASGFPVYRDRMAWYRQAPGKEREWVAAIYSAGQQTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDVGHHYEYYDYWGQGTQVTVS |
| SB68, Synthetic nanobody | C | 127 | Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct | SSSQVQLVESGGGSVQAGGSLRLSCAASGSISSITYLGWFRQAPGKEREGVAALITVNGHTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAAWGYAWPLHQDDYWYWGQGTQVTVS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2020-11-01 Deposition Author(s): Ahmad, J. , Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.