Crystal structure of m4h2k1 fab bound to hiv-1 bg505 gp120 core and to 17b fab
PDB DOI: 10.2210/pdb7klc/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1 , Mus Musculus
Deposited: 2020-10-29 Deposition Author(s): Kumar, S. , Wilson, I.A.
Crystal structure of m4h2k1 fab bound to hiv-1 bg505 gp120 core and to 17b fab
Primary Citation of Related Structures: 7KLC
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
M4H2K1 Fab heavy chain | H | 226 | Homo Sapiens , Human Immunodeficiency Virus 1 , Mus Musculus | EVKLEESGGGLVQPGGSMKLSCVASGITFSNSWMSWVRQSPEKGLEWVAEIRLKAQNYATHYAASVKGRFTISRDDSKSSVYLQMNNLRPEDTGIYYCTTPLGGYFDMDYWGQGTSLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK |
M4H2K1 Fab light chain | L | 218 | Homo Sapiens , Human Immunodeficiency Virus 1 , Mus Musculus | DIVLTQSPASLAVSLGQRATISCRASESVDIYGISFMNWFQQRPGQPPKLLIYAASNRGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
17b Fab light chain | C | 214 | Homo Sapiens , Human Immunodeficiency Virus 1 , Mus Musculus | DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG |
17b Fab heavy chain | D | 229 | Homo Sapiens , Human Immunodeficiency Virus 1 , Mus Musculus | EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSXXTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
HIV-1 clade A BG505 gp120,HIV-1 clade A BG505 gp120 | A | 383 | Homo Sapiens , Human Immunodeficiency Virus 1 , Mus Musculus | VWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVGAGNCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIE |
Method: X-RAY DIFFRACTION
Deposited Date: 2020-10-29 Deposition Author(s): Kumar, S. , Wilson, I.A.