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FASTA Sequence PDB Format mmCIF Format
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7K22

Murine polyomavirus pentavalent capsomer with 8a7h5 fab, subparticle reconstruction

PDB DOI: 10.2210/pdb7k22/pdb

Classification: VIRAL PROTEIN
Organism(s): Mus Musculus Polyomavirus 1 , Rattus Norvegicus

Deposited: 2020-09-08
Deposition Author(s): Goetschius, D.J. , Hafenstein, S.L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

7k22
Literature

Murine polyomavirus pentavalent capsomer with 8a7h5 fab, subparticle reconstruction

Goetschius, D.J. , Hafenstein, S.L.

Primary Citation of Related Structures: 7K22


Proteins
Molecule Chains Sequence Length Organism Sequence
8A7H5 Fab light chain L1 109 Mus Musculus Polyomavirus 1 , Rattus Norvegicus DIVMTQSPTSMSISVGDRVTMNCRASQNVYSNVDWYQQKTGQSPKLVIYKASNRYTGVPDRFTGSGSGTYFTLTITNIQTEDLAVYYCLQSNAFPFTFGSGTKLETTRA
8A7H5 Fab light chain L2 109 Mus Musculus Polyomavirus 1 , Rattus Norvegicus DIVMTQSPTSMSISVGDRVTMNCRASQNVYSNVDWYQQKTGQSPKLVIYKASNRYTGVPDRFTGSGSGTYFTLTITNIQTEDLAVYYCLQSNAFPFTFGSGTKLETTRA
8A7H5 Fab light chain L3 109 Mus Musculus Polyomavirus 1 , Rattus Norvegicus DIVMTQSPTSMSISVGDRVTMNCRASQNVYSNVDWYQQKTGQSPKLVIYKASNRYTGVPDRFTGSGSGTYFTLTITNIQTEDLAVYYCLQSNAFPFTFGSGTKLETTRA
8A7H5 Fab light chain L4 109 Mus Musculus Polyomavirus 1 , Rattus Norvegicus DIVMTQSPTSMSISVGDRVTMNCRASQNVYSNVDWYQQKTGQSPKLVIYKASNRYTGVPDRFTGSGSGTYFTLTITNIQTEDLAVYYCLQSNAFPFTFGSGTKLETTRA
8A7H5 Fab light chain L5 109 Mus Musculus Polyomavirus 1 , Rattus Norvegicus DIVMTQSPTSMSISVGDRVTMNCRASQNVYSNVDWYQQKTGQSPKLVIYKASNRYTGVPDRFTGSGSGTYFTLTITNIQTEDLAVYYCLQSNAFPFTFGSGTKLETTRA
8A7H5 Fab heavy chain H1 117 Mus Musculus Polyomavirus 1 , Rattus Norvegicus EESGGGLVQPGKSLKLSCSASGFTFSSYGMHWIRQVPGKGLDWVAYISSASDTFYADAVKERFTISRDNAKNTLYLRLNSLKSEDTAIYYCARTRYPTDHFYDWFPYWGQGTLVTVS
8A7H5 Fab heavy chain H2 117 Mus Musculus Polyomavirus 1 , Rattus Norvegicus EESGGGLVQPGKSLKLSCSASGFTFSSYGMHWIRQVPGKGLDWVAYISSASDTFYADAVKERFTISRDNAKNTLYLRLNSLKSEDTAIYYCARTRYPTDHFYDWFPYWGQGTLVTVS
8A7H5 Fab heavy chain H3 117 Mus Musculus Polyomavirus 1 , Rattus Norvegicus EESGGGLVQPGKSLKLSCSASGFTFSSYGMHWIRQVPGKGLDWVAYISSASDTFYADAVKERFTISRDNAKNTLYLRLNSLKSEDTAIYYCARTRYPTDHFYDWFPYWGQGTLVTVS
8A7H5 Fab heavy chain H4 117 Mus Musculus Polyomavirus 1 , Rattus Norvegicus EESGGGLVQPGKSLKLSCSASGFTFSSYGMHWIRQVPGKGLDWVAYISSASDTFYADAVKERFTISRDNAKNTLYLRLNSLKSEDTAIYYCARTRYPTDHFYDWFPYWGQGTLVTVS
8A7H5 Fab heavy chain H5 117 Mus Musculus Polyomavirus 1 , Rattus Norvegicus EESGGGLVQPGKSLKLSCSASGFTFSSYGMHWIRQVPGKGLDWVAYISSASDTFYADAVKERFTISRDNAKNTLYLRLNSLKSEDTAIYYCARTRYPTDHFYDWFPYWGQGTLVTVS
Capsid protein VP1 F1 383 Mus Musculus Polyomavirus 1 , Rattus Norvegicus APKRKSGVSKCETKCTKACPRPAPVPKLLIKGGMEVLDLVTGPDSVTEIEAFLNPRMGQPPTPESLTEGGQYYGWSRGINLATSDTEDSPENNTLPTWSMAKLQLPMLNEDLTCDTLQMWEAVSVKTEVVGSGSLLDVHGFNKPTDTVNTKGISTPVEGSQYHVFAVGGEPLDLQGLVTDARTKYKEEGVVTIKTITKKDMVNKDQVLNPISKAKLDKDGMYPVEIWHPDPAKNENTRYFGNYTGGTTTPPVLQFTNTLTTVLLDENGVGPLCKGEGLYLSCVDIMGWRVTRNYDVHHWRGLPRYFKITLRKRWVKNPYPMASLISSLFNNMLPQVQGQPMEGENTQVEEVRVYDGTEPVPGDPDMTRYVDRFGKTKTVFPGN
Capsid protein VP1 F2 383 Mus Musculus Polyomavirus 1 , Rattus Norvegicus APKRKSGVSKCETKCTKACPRPAPVPKLLIKGGMEVLDLVTGPDSVTEIEAFLNPRMGQPPTPESLTEGGQYYGWSRGINLATSDTEDSPENNTLPTWSMAKLQLPMLNEDLTCDTLQMWEAVSVKTEVVGSGSLLDVHGFNKPTDTVNTKGISTPVEGSQYHVFAVGGEPLDLQGLVTDARTKYKEEGVVTIKTITKKDMVNKDQVLNPISKAKLDKDGMYPVEIWHPDPAKNENTRYFGNYTGGTTTPPVLQFTNTLTTVLLDENGVGPLCKGEGLYLSCVDIMGWRVTRNYDVHHWRGLPRYFKITLRKRWVKNPYPMASLISSLFNNMLPQVQGQPMEGENTQVEEVRVYDGTEPVPGDPDMTRYVDRFGKTKTVFPGN
Capsid protein VP1 F3 383 Mus Musculus Polyomavirus 1 , Rattus Norvegicus APKRKSGVSKCETKCTKACPRPAPVPKLLIKGGMEVLDLVTGPDSVTEIEAFLNPRMGQPPTPESLTEGGQYYGWSRGINLATSDTEDSPENNTLPTWSMAKLQLPMLNEDLTCDTLQMWEAVSVKTEVVGSGSLLDVHGFNKPTDTVNTKGISTPVEGSQYHVFAVGGEPLDLQGLVTDARTKYKEEGVVTIKTITKKDMVNKDQVLNPISKAKLDKDGMYPVEIWHPDPAKNENTRYFGNYTGGTTTPPVLQFTNTLTTVLLDENGVGPLCKGEGLYLSCVDIMGWRVTRNYDVHHWRGLPRYFKITLRKRWVKNPYPMASLISSLFNNMLPQVQGQPMEGENTQVEEVRVYDGTEPVPGDPDMTRYVDRFGKTKTVFPGN
Capsid protein VP1 F4 383 Mus Musculus Polyomavirus 1 , Rattus Norvegicus APKRKSGVSKCETKCTKACPRPAPVPKLLIKGGMEVLDLVTGPDSVTEIEAFLNPRMGQPPTPESLTEGGQYYGWSRGINLATSDTEDSPENNTLPTWSMAKLQLPMLNEDLTCDTLQMWEAVSVKTEVVGSGSLLDVHGFNKPTDTVNTKGISTPVEGSQYHVFAVGGEPLDLQGLVTDARTKYKEEGVVTIKTITKKDMVNKDQVLNPISKAKLDKDGMYPVEIWHPDPAKNENTRYFGNYTGGTTTPPVLQFTNTLTTVLLDENGVGPLCKGEGLYLSCVDIMGWRVTRNYDVHHWRGLPRYFKITLRKRWVKNPYPMASLISSLFNNMLPQVQGQPMEGENTQVEEVRVYDGTEPVPGDPDMTRYVDRFGKTKTVFPGN
Capsid protein VP1 F5 383 Mus Musculus Polyomavirus 1 , Rattus Norvegicus APKRKSGVSKCETKCTKACPRPAPVPKLLIKGGMEVLDLVTGPDSVTEIEAFLNPRMGQPPTPESLTEGGQYYGWSRGINLATSDTEDSPENNTLPTWSMAKLQLPMLNEDLTCDTLQMWEAVSVKTEVVGSGSLLDVHGFNKPTDTVNTKGISTPVEGSQYHVFAVGGEPLDLQGLVTDARTKYKEEGVVTIKTITKKDMVNKDQVLNPISKAKLDKDGMYPVEIWHPDPAKNENTRYFGNYTGGTTTPPVLQFTNTLTTVLLDENGVGPLCKGEGLYLSCVDIMGWRVTRNYDVHHWRGLPRYFKITLRKRWVKNPYPMASLISSLFNNMLPQVQGQPMEGENTQVEEVRVYDGTEPVPGDPDMTRYVDRFGKTKTVFPGN
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-09-08
Deposition Author(s): Goetschius, D.J. , Hafenstein, S.L.