7JZV
Cryo-em structure of the brca1-ubch5c/bard1 e3-e2 module bound to a nucleosome
PDB DOI: 10.2210/pdb7jzv/pdb
Classification: LIGASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2020-09-02 Deposition Author(s): Burrell, A.L. , Dimaio, F. , Farrell, D.P. , Hansen, J.M. , Klevit, R.E. , Kollman, J.M. , Witus, S.R.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.9 Å
Cryo-em structure of the brca1-ubch5c/bard1 e3-e2 module bound to a nucleosome
Burrell, A.L. , Dimaio, F. , Farrell, D.P. , Hansen, J.M. , Klevit, R.E. , Kollman, J.M. , Witus, S.R.
Primary Citation of Related Structures: 7JZV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| BRCA1,Ubiquitin-conjugating enzyme E2 D3 | A | 258 | Homo Sapiens , Synthetic Construct | GPDLSALRVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLKIICAFQLDTGLEYANSGSGSGSGALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIKLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM |
| BRCA1-associated RING domain protein 1 | B | 115 | Homo Sapiens , Synthetic Construct | MEPDGRGAWAHSRAALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSMIQLCSKLRNLLHDNELSDLKEDKPRKSLFNDAGNKK |
| Histone H2A type 2-A | N | 133 | Homo Sapiens , Synthetic Construct | GAMGSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK |
| Histone H2B type 1-K | O | 125 | Homo Sapiens , Synthetic Construct | PEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK |
| Histone H3.2 | P | 135 | Homo Sapiens , Synthetic Construct | ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLAAIHAKRVTIMPKDIQLARRIRGERA |
| Histone H4 | Q | 102 | Homo Sapiens , Synthetic Construct | SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Widom 601 153-bp | x | 153 | NA | ATCACAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCAGGAT |
| Widom 601 153-bp | y | 153 | NA | ATCCTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGTGAT |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-09-02 Deposition Author(s): Burrell, A.L. , Dimaio, F. , Farrell, D.P. , Hansen, J.M. , Klevit, R.E. , Kollman, J.M. , Witus, S.R.