7JYV
Crystal structure of hla a*2402 in complex with yfspirvtf, an 9-mer influenza epitope
PDB DOI: 10.2210/pdb7jyv/pdb
Classification: IMMUNE SYSTEM Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2020-09-01 Deposition Author(s): Gras, S. , Nguyen, A.T. , Rossjohn, J. , Szeto, C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.51 Å
Crystal structure of hla a*2402 in complex with yfspirvtf, an 9-mer influenza epitope
Gras, S. , Nguyen, A.T. , Rossjohn, J. , Szeto, C.
Primary Citation of Related Structures: 7JYV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| MHC class I antigen | A | 278 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSS |
| Beta-2-microglobulin | B | 100 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| NP peptide from influenza, YFSPIRVTF | C | 9 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | YFSPIRVTF |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2020-09-01 Deposition Author(s): Gras, S. , Nguyen, A.T. , Rossjohn, J. , Szeto, C.