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7JVB

Crystal structure of the sars-cov-2 spike receptor-binding domain (rbd) with nanobody nb20

PDB DOI: 10.2210/pdb7jvb/pdb

Classification: VIRAL PROTEIN
Organism(s): Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2020-08-20
Deposition Author(s): Liu, H. , Sang, Z. , Schneidman-Duhovny, D. , Shi, Y. , Xiang, Y. , Xiao, Z. , Zhang, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.287 Å

7jvb
Literature

Crystal structure of the sars-cov-2 spike receptor-binding domain (rbd) with nanobody nb20

Liu, H. , Sang, Z. , Schneidman-Duhovny, D. , Shi, Y. , Xiang, Y. , Xiao, Z. , Zhang, C.

Primary Citation of Related Structures: 7JVB


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 224 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 GRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF
Spike protein S1 B 224 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 GRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF
Nanobody Nb20 C 117 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGLVQAGGSLRLSCAVSGAGAHRVGWFRRAPGKEREFVAAIGASGGMTNYLDSVKGRFTISRDNAKNTIYLQMNSLKPQDTAVYYCAARDIETAEYIYWGQGTQVTVSS
Nanobody Nb20 D 117 Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGLVQAGGSLRLSCAVSGAGAHRVGWFRRAPGKEREFVAAIGASGGMTNYLDSVKGRFTISRDNAKNTIYLQMNSLKPQDTAVYYCAARDIETAEYIYWGQGTQVTVSS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-08-20
Deposition Author(s): Liu, H. , Sang, Z. , Schneidman-Duhovny, D. , Shi, Y. , Xiang, Y. , Xiao, Z. , Zhang, C.