Crystal structure of sars-cov-2 receptor binding domain n501y mutant in complex with neutralizing nanobody 20g6
PDB DOI: 10.2210/pdb7fbk/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Chiloscyllium Plagiosum , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2021-07-11 Deposition Author(s): Feng, B. , Liu, J. , Xu, T. , Zhu, J.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Spike protein S1 | A | 230 | Chiloscyllium Plagiosum , Severe Acute Respiratory Syndrome Coronavirus 2 | DAAQPAITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGPAAARGGPEQKLISEEDLNSAVDHHHHHH |
Spike protein S1 | B | 230 | Chiloscyllium Plagiosum , Severe Acute Respiratory Syndrome Coronavirus 2 | DAAQPAITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGPAAARGGPEQKLISEEDLNSAVDHHHHHH |
New antigen receptor variable domain | C | 129 | Chiloscyllium Plagiosum , Severe Acute Respiratory Syndrome Coronavirus 2 | MAMAERVEQTPTTTTKEAGESLTINCVLRDSPCSLDSTFWYFTKKGATKKENLSNGGRYAETVNKASKSFSLQISDLRVEDSGTYHCRAYSTTGDERDCRWQGYIEGYGTIVTVKSSGSSGLEHHHHHH |
New antigen receptor variable domain | D | 129 | Chiloscyllium Plagiosum , Severe Acute Respiratory Syndrome Coronavirus 2 | MAMAERVEQTPTTTTKEAGESLTINCVLRDSPCSLDSTFWYFTKKGATKKENLSNGGRYAETVNKASKSFSLQISDLRVEDSGTYHCRAYSTTGDERDCRWQGYIEGYGTIVTVKSSGSSGLEHHHHHH |
Method: X-RAY DIFFRACTION