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7F9O
Psi-ndh supercomplex of barley
PDB DOI: 10.2210/pdb7f9o/pdb
Classification: PHOTOSYNTHESIS Organism(s): Hordeum Vulgare Subsp. Spontaneum
Deposited: 2021-07-04 Deposition Author(s): Han, G.Y. , Shen, J.R. , Shen, L. , Tang, K. , Wang, W.D. , Zhang, X.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.5 Å
Psi-ndh supercomplex of barley
Han, G.Y. , Shen, J.R. , Shen, L. , Tang, K. , Wang, W.D. , Zhang, X.
Primary Citation of Related Structures: 7F9O
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosynthetic NDH subunit of subcomplex L1 | A | 154 | Hordeum Vulgare Subsp. Spontaneum | NYRSYVDANDGYSYLYPADWRDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAIFNLVNEVYAAPNQIPTIYEMQERTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVVADSFKISDLNA |
| Photosystem I reaction center subunit IV, chloroplastic | E | 147 | Hordeum Vulgare Subsp. Spontaneum | MASTNMASATSRFMLAAGIPSGANGGVSSRVSFLPSNRLGLKLVARAEEPTAAAPAEPAPAADEKPEAAVATKEPAKAKPPPRGPKRGTKVKILRRESYWYNGTGSVVTVDQDPNTRYPVVVRFAKVNYAGVSTNNYALDEIKEVAA |
| Photosystem I reaction center subunit VI, chloroplastic | K | 143 | Hordeum Vulgare Subsp. Spontaneum | MASLVAVQPAAVKGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLDDIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIGGGSLVAYVSASASPDLLPIKKGPQLPPTPGPRGKI |
| NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic | N | 117 | Hordeum Vulgare Subsp. Spontaneum | LHEYDIFWTFLIIASLIPILAFSISGLLAPVSEGPEKLSSYESGIEPMGGAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILVVGLVYAWRKGALEWS |
| Photosystem I reaction center subunit VIII | L | 36 | Hordeum Vulgare Subsp. Spontaneum | MTDLNLPSIFVPLVGLVFPAIAMTSLFLYVQKKKIV |
| NAD(P)H-quinone oxidoreductase chain 4, chloroplastic | O | 499 | Hordeum Vulgare Subsp. Spontaneum | SYFPWLTILVVLPIFAGSLIFFLPHKGNKIVRWYTISICLLEFLLMTYAFCYHFQLEDPLIQLKEDYKWIDVFDFHWRLGIDGLSLGSILLTGFITTLATLAAWPITRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPATLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKALITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNANFVDSGPRELFILICIFLPVIGIGIYPDFVLSLSVDRVEALLSNYYPK |
| Chlorophyll a-b binding protein Lhca1 | 1 | 247 | Hordeum Vulgare Subsp. Spontaneum | MAMASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRNIYGP |
| NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic | P | 100 | Hordeum Vulgare Subsp. Spontaneum | MMFEHVLFLSVYLFSIGIYGLITSRNMVRALICLELILNSINLNLVTFSDLFDSRQLKGDIFAIFVIALAAAEAAIGLSILSSIHRNRKSTRINQSNLLN |
| Chlorophyll a-b binding protein, chloroplastic | 2 | 255 | Hordeum Vulgare Subsp. Spontaneum | MALVSSSSATAVAALPSNGLAGARTSFLGAAGKAAASRTSFAVRAAAPERPIWFPGSTPPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIFRAFAPK |
| Chlorophyll a-b binding protein, chloroplastic | 3 | 269 | Hordeum Vulgare Subsp. Spontaneum | MAAQGLLSGRQLLGRPLQSSFSRSSSSRKSPFVVRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGAIPPAGTYQYWADPYTLFVFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSLKFH |
| NADH-plastoquinone oxidoreductase subunit 5 | Q | 777 | Hordeum Vulgare Subsp. Spontaneum | MKNSSIFSYSFYLFFQKEIRVGLVNRKQFYRKIEVKIAISFLMEHTYQYAWVIPLLPLPVIMSMGFGLILIPTATKNLRRIWAFPSVLLLSIAMVFSVQLSIQQINGSSIYQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDGYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFQIANNWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLLPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNMVLMGGLRKYIPITRTTFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFGGYLRVHFQNYSSTKESSLYSISLWGKRIPKGVNRDFVLSTTKSGVSFFSQNIPKIQGNTRNRIGSFTTSFGAKNTFAYPHETGNTMLFPLLILLLFTLFIGFIGISFDNGGMDNGIAELTILSKWLTPSKNFTQESSNSFVNSYEFITNAISSVTLAIFGLFIAYIFYGSAYSFFQNLDLINSFVKRNPKKEFLDQVKKNIYSWSYNRGYIDIFYTRVFTLGIRGLTELTEFFDKGVIDGITNGVGLASFCIGEEIKYVGGGRISSYLFFFLCYVSVFLF |
| Chlorophyll a-b binding protein Lhca5 | 5 | 257 | Hordeum Vulgare Subsp. Spontaneum | MALAANAHGRVCTLSSRPPAPFSSRSTVAMPGHHSESPRARFAVRAIAERATWLPGLDPPAYLDGTLPGDYGFDPLGLGEQPEDLKWYVQAELVHCRFAMAGVAGILGTDLIRVSGIGNLPVWFEAGATKFDFANTTALFFVQLLLMGFVETKRYMDFVSPGSQAKEGTFLGIEASLEGLQPGYPGGPLFNPMGLAKDIENANEVKLKEIKNGRLAMVAMLGFIVQASVTHAGPIDNLLTHLSDPFNKNIIHALTLS |
| Photosystem I iron-sulfur center | G | 81 | Hordeum Vulgare Subsp. Spontaneum | MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLGPETTRSMALSY |
| Photosystem I reaction center subunit IX | M | 42 | Hordeum Vulgare Subsp. Spontaneum | MRDIKTYLSVAPVLSTLWFGALAGLLIEINRLFPDALSFPFF |
| Photosynthetic NDH subunit of subcomplex L2 | B | 216 | Hordeum Vulgare Subsp. Spontaneum | MATLVKHLILCSSTTTSSSATPSPSNRRPPSSPDGADKRAHLTQSSTRRLAVAASTAMVATAALSARRPAAPPPAMAAEAAAVRLPVPPGTVPRWGTRSYVRERFFEPGLTTEEAAARIRQTAEGMRTLRPMLETMSWKYVLFYVRLKSKYLDLDLTTAMAGVPEPRRPEYVLVANELVDNMTEFDRFVRTPKVYESYLYYEKTLKSLDDVAEFLG |
| Photosystem I reaction center subunit III, chloroplastic | F | 235 | Hordeum Vulgare Subsp. Spontaneum | MAALAASIATSTAFAAKPRLSRPPARLSVSCSASSGDNNNSTATPSLSASIKTFSAALALSSVLLSSAATSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADIGY |
| Chlorophyll a-b binding protein Lhca4 | R | 197 | Hordeum Vulgare Subsp. Spontaneum | KGSWLPGLQSPAYLDGSLAGDNGFDPLALAEDPEDLRWFVQAELVNGRWAMLGVAGMLIPEVLTKAGLLNAPEWYDAGKETYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGSVFNPLNFAPTLENKEKELANGRLAMLAFLGFLVQHNVTGKGPFENLQQHLADPWHNTIIQTI |
| Chlorophyll a-b binding protein, chloroplastic | S | 211 | Hordeum Vulgare Subsp. Spontaneum | TVCEPLGPDRPVWFPGTAPPPWLDGSLPGDFGFDPLGFGSEPESLRWFAQAELMHGRWAMLAVAGILIPEILQKWGFMEEFSWYTAGEREYFADPWTLFVTQMALMGWVEGRRWMDYLNPGSVDIEPRFPNRKNPTPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQVVYTGQGPLDNLFAHLADPGHCNIFSA |
| NAD(P)H-quinone oxidoreductase subunit I, chloroplastic | T | 165 | Hordeum Vulgare Subsp. Spontaneum | PMVTGFMSYGQQTIRATRYIGQSFITTLSHTNRLPITIHYPYEKSITPERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWRFEKDIKRKQLLNYSIDFGVCIFCGNCVEYCPTSCLSMTEEYELSTYDRHELNYNQIALSRLPISIMGDYTIQTIRNSSESKIN |
| NAD(P)H-quinone oxidoreductase subunit J, chloroplastic | U | 159 | Hordeum Vulgare Subsp. Spontaneum | MQQGWLSNWLVKHEVVHRSLGFDHRGIETLQIKAGDWDSIAVILYVYGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRIPSVFWIWRSADFQERESYDMVGISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQDAH |
| NAD(P)H-quinone oxidoreductase subunit K, chloroplastic | V | 245 | Hordeum Vulgare Subsp. Spontaneum | MVLTEYLDKKKEGKDSIETVMNLIEFPLLDQTSSNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKISREIVEDRTLSQNKKRCFTTSHKLYVRRSTHTGTYEQELLYQSPSTLDISSETFLKSKSPVPSYKLVN |
| NAD(P)H-quinone oxidoreductase subunit L, chloroplastic | W | 192 | Hordeum Vulgare Subsp. Spontaneum | MEITASWRFLPVASSLPPALLLARRQASCPWSLQQPAISKSRILCRLHDKPFPTAQSSQLQKLASVLQCGAIWAAVQAPAALATVSGEEDIDILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFVNFRKFPRDKTMKYPWSKPKEGTPLFKDRYPQIDSFKEKYF |
| NAD(P)H-quinone oxidoreductase subunit M, chloroplastic | X | 213 | Hordeum Vulgare Subsp. Spontaneum | MATAAASSLLSPASKFALQSRRSSPKTAPRSVRFLPVRAQQQVKEEEPAATVPPPQEEGQATTAAAAKGPAQSLPRQPRAESKNMGREYGSQWLSCTTRHVRIYAAYIDPETNAFDQTQTDKLTLMLDPTEEFVWTDETCQMVYNEFQDLVDHYEGAPLSEYTLRLIGSDLEHYIRKLLYDGEIKYNMRSRVLNFSMGKPRVKFNSSQIPDVK |
| NAD(P)H-quinone oxidoreductase subunit N, chloroplastic | Y | 233 | Hordeum Vulgare Subsp. Spontaneum | MWSGAAAAVAARSVSPPLHAPTSLTGRRGAGRPSTVSVRAGGGLMDFVGGDLVKPDLGRWLDDVEKHKALAIYPPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPESTLTKIHPVCPPSLGRQPVARWYFPPEVDYRLSLLHPDAKGLIVWVYEAKVSFRLSLAALTLNFLIVFPCSFRLQVLSKAELQFLAMLPDLRPKVRVIAECGNWRKFIWKPLKQISGLEPDPDAEE |
| Photosynthetic NDH subunit of subcomplex L2 | C | 227 | Hordeum Vulgare Subsp. Spontaneum | MASTYLSSFQAAAAATSGGASTRPRPRPRPRVVTCHTSEPSGRRSACLSLGLGLATAAVLHTTPARAIADGDEEPEPANNGWWLTEFPLPVPKIRNKEINNGETGTRSFVKNGIYMADIGPSFAAHAYRVRSSAFDLLALEDLLGKEASNYVNKYLRLKATFIYYDFDKLITAADPDAKPPLLDLANRLFDSFEKLQAAVTTKDDTDIGSCYADTKLILQEVMTRMA |
| Unidentified stromal protein | Z | 61 | Hordeum Vulgare Subsp. Spontaneum | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| Photosynthetic NDH subunit of subcomplex L4 | 4 | 130 | Hordeum Vulgare Subsp. Spontaneum | ARAALELHRSLCPLLVSPRELEFLQVRDPSFCSVSMVVTQIHYTARFPDGTVFDSSYKRGRPLTMRIGAGKILRGLQQGIGGGGGVTPMLVGGKRKLMIPPILAYGPEPAGCFSEAVFAQAEMNFCALAA |
| Photosystem I reaction center subunit II, chloroplastic | D | 205 | Hordeum Vulgare Subsp. Spontaneum | MAMATQASAATRHLITAAWSPSAKPRPATLAMPSSARGPAPLFAAAPDTPAPAAPPAEPAPAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNSFDI |
| Photosynthetic NDH subunit of subcomplex B1 | 6 | 469 | Hordeum Vulgare Subsp. Spontaneum | MQTPTMPTPMAARPTSTMATKLPAPSATPRQCHLLPGRRVAGLARASSKKRNPWLDPFDDGPDEEFDYTGVYSGGKQEEDPRPPEDAENPYGFLRFPMGYMPELDSLASKVRGDVRRVCCVVSGGVYENVLFFPVVQMLKDRYPGVLVDVVASARGKQVYEMCKNVRYANVYDPDDEWPEPAEYTHQLGVMKNRYYDMVLSTKLAGTGHALFLFMSSAREKVGYVYPNVNGAGAGLFLTEMFKPATTNLADGGYNMYQDMLEWLGRPAKGVPQQPIPPLRVSISKKLRAVVEDKYNRAGVEKGKYVVIHGIESDSVANMKSRGDDDCLLPLELWAEIAKEISSGGNGLRPLFVMPHERHREEIEEIVGEETAYLFITTPGQLTCLINDSAGVVATNTAAVQLANARDKPCVALFSSKEKARLFLPYVEERKSCTVVASATGKLAGIDIEAVKKAVKDLEPAPSFALAQT |
| Photosynthetic NDH subunit of subcomplex B2 | 7 | 361 | Hordeum Vulgare Subsp. Spontaneum | MAAASFLPLHLPASPRPATVAARAASGVASMVPAQASQLEEAFGRKGLRFGTDATGAPTAELSVRNGSSLQLRLNDGLVTSYRPKVSWEGGDGCRELLHTVVGAGAGAVRGGVGLVLNEAASSSSSSSPLLGASEWSVADVDSDSYDAVQVELGCVASKLEVSYVVTLYPLSMATAVIVKNNGARPVELTAAVLSHIKFDKRRGTAVEGLRGCPYCSHPPPASGFALLTPAEAMKREESGWFGGGGGEEPRQGAWTVEENLYTILKKKVSRVYAAPPEERKKRIYNTAPSKFTTIDQSSGLGFRLVRMGFEDMYLGSPGGMYDKFGNDYFLCTGPASILVPVVVGPGEEWRGAQVIEHDNL |
| Photosynthetic NDH subunit of subcomplex B3 | 8 | 119 | Hordeum Vulgare Subsp. Spontaneum | FAFVSPRLLPDGTPDVHYRTACGGQKLRDIMLDAYIDLYGPYDKLLLNCSGGGECGTCIVEVVEGGEMLSPKNEVEKEKLKRKPKSWRLACQATVGNPDSTGQMVIQQLPEWKVHKWDK |
| Photosynthetic NDH subunit of subcomplex B4 | 9 | 83 | Hordeum Vulgare Subsp. Spontaneum | NQRDWVVTKSIWHLSDTAIKSFYTFYAMFTVWGVCFFASMKASMADPFYDSEHYRGQGGDGTVHWYYDRQEDIEATARGDLLR |
| Photosystem I reaction center subunit VI, chloroplastic | H | 143 | Hordeum Vulgare Subsp. Spontaneum | MASLVAVQPAAVKGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLDDIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIGGGSLVAYVSASASPDLLPIKKGPQLPPTPGPRGKI |
| Photosynthetic NDH subunit of subcomplex B5 | 0 | 155 | Hordeum Vulgare Subsp. Spontaneum | GPLTEIEPDLQEDPIDKWRTNGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQGFQALISWSFPPAVILGMAFDVPGEYLYIGAAIFIVVFCIIEMDKPDKPHNFEPEIYMMERSKRDKLIADYNSMDIWDFNEKYGELWDFTVN |
| Photosystem I reaction center subunit VIII | I | 36 | Hordeum Vulgare Subsp. Spontaneum | MTDLNLPSIFVPLVGLVFPAIAMTSLFLYVQKKKIV |
| Photosystem I reaction center subunit IX | J | 42 | Hordeum Vulgare Subsp. Spontaneum | MRDIKTYLSVAPVLSTLWFGALAGLLIEINRLFPDALSFPFF |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-07-04 Deposition Author(s): Han, G.Y. , Shen, J.R. , Shen, L. , Tang, K. , Wang, W.D. , Zhang, X.