7F5G
The crystal structure of rbd-nanobody complex, dl4 (sa4)
PDB DOI: 10.2210/pdb7f5g/pdb
Classification: VIRAL PROTEIN Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos
Deposited: 2021-06-22 Deposition Author(s): Lai, Y. , Li, D. , Li, T. , Tan, J. , Zhou, Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.75 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike glycoprotein | A | 213 | Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | AGSPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTGTLEVLFQ |
| Spike glycoprotein | C | 213 | Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | AGSPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTGTLEVLFQ |
| Nanobody DL4 | B | 146 | Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | GSSSQVQLQESGGGLVQPGGSLRLSCAASGSFFEFGTVGWFRQAPGKQRELVSRITGNDHRYYADSVKGRFTISRDNDETTVYLQMDSLKPEDTAIYHCNILEGQRWSNYWGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH |
| Nanobody DL4 | D | 146 | Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | GSSSQVQLQESGGGLVQPGGSLRLSCAASGSFFEFGTVGWFRQAPGKQRELVSRITGNDHRYYADSVKGRFTISRDNDETTVYLQMDSLKPEDTAIYHCNILEGQRWSNYWGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH |
Experimental Data
Method: X-RAY DIFFRACTION