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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7F2P

The head structure of helicobacter pylori bacteriophage khp40

PDB DOI: 10.2210/pdb7f2p/pdb

Classification: VIRUS
Organism(s): Helicobacter Phage Khp40

Deposited: 2021-06-13
Deposition Author(s): Iwasaki, K. , Kamiya, R. , Matsuzaki, S. , Miyazaki, N. , Murata, K. , Uchiyama, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

7f2p
Literature

The head structure of helicobacter pylori bacteriophage khp40

Iwasaki, K. , Kamiya, R. , Matsuzaki, S. , Miyazaki, N. , Murata, K. , Uchiyama, J.

Primary Citation of Related Structures: 7F2P


Proteins
Molecule Chains Sequence Length Organism Sequence
Cement protein gp16 1 124 Helicobacter Phage Khp40 MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKDYTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
Cement protein gp16 2 124 Helicobacter Phage Khp40 MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKDYTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
Cement protein gp16 3 124 Helicobacter Phage Khp40 MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKDYTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
Cement protein gp16 4 124 Helicobacter Phage Khp40 MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKDYTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
Cement protein gp16 5 124 Helicobacter Phage Khp40 MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKDYTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
Cement protein gp16 6 124 Helicobacter Phage Khp40 MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKDYTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
Cement protein gp16 7 124 Helicobacter Phage Khp40 MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKDYTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
Cement protein gp16 8 124 Helicobacter Phage Khp40 MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKDYTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
Cement protein gp16 9 124 Helicobacter Phage Khp40 MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKDYTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
KHP40 MCP A 386 Helicobacter Phage Khp40 MLEKLNNINFNNISNNPNLGIEVGREIQNASWVKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNAAMNVATIRKAIFHARNGLKADNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFTRYLNKANVSNIVTPMQLKEKLNQEKLNQEKLNQEKLKNKDISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
KHP40 MCP B 386 Helicobacter Phage Khp40 MLEKLNNINFNNISNNPNLGIEVGREIQNASWVKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNAAMNVATIRKAIFHARNGLKADNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFTRYLNKANVSNIVTPMQLKEKLNQEKLNQEKLNQEKLKNKDISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
KHP40 MCP C 386 Helicobacter Phage Khp40 MLEKLNNINFNNISNNPNLGIEVGREIQNASWVKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNAAMNVATIRKAIFHARNGLKADNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFTRYLNKANVSNIVTPMQLKEKLNQEKLNQEKLNQEKLKNKDISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
KHP40 MCP D 386 Helicobacter Phage Khp40 MLEKLNNINFNNISNNPNLGIEVGREIQNASWVKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNAAMNVATIRKAIFHARNGLKADNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFTRYLNKANVSNIVTPMQLKEKLNQEKLNQEKLNQEKLKNKDISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
KHP40 MCP E 386 Helicobacter Phage Khp40 MLEKLNNINFNNISNNPNLGIEVGREIQNASWVKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNAAMNVATIRKAIFHARNGLKADNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFTRYLNKANVSNIVTPMQLKEKLNQEKLNQEKLNQEKLKNKDISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
KHP40 MCP F 386 Helicobacter Phage Khp40 MLEKLNNINFNNISNNPNLGIEVGREIQNASWVKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNAAMNVATIRKAIFHARNGLKADNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFTRYLNKANVSNIVTPMQLKEKLNQEKLNQEKLNQEKLKNKDISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
KHP40 MCP G 386 Helicobacter Phage Khp40 MLEKLNNINFNNISNNPNLGIEVGREIQNASWVKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNAAMNVATIRKAIFHARNGLKADNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFTRYLNKANVSNIVTPMQLKEKLNQEKLNQEKLNQEKLKNKDISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
KHP40 MCP H 386 Helicobacter Phage Khp40 MLEKLNNINFNNISNNPNLGIEVGREIQNASWVKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNAAMNVATIRKAIFHARNGLKADNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFTRYLNKANVSNIVTPMQLKEKLNQEKLNQEKLNQEKLKNKDISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
KHP40 MCP I 386 Helicobacter Phage Khp40 MLEKLNNINFNNISNNPNLGIEVGREIQNASWVKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNAAMNVATIRKAIFHARNGLKADNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFTRYLNKANVSNIVTPMQLKEKLNQEKLNQEKLNQEKLKNKDISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-06-13
Deposition Author(s): Iwasaki, K. , Kamiya, R. , Matsuzaki, S. , Miyazaki, N. , Murata, K. , Uchiyama, J.