7EQD
Structure of photosynthetic lh1-rc super-complex of rhodospirillum rubrum
PDB DOI: 10.2210/pdb7eqd/pdb
Classification: PHOTOSYNTHESIS Organism(s): Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1)
Deposited: 2021-05-01 Deposition Author(s): Hall, M. , Humbel, B.M. , Ji, X.-C. , Kanno, R. , Kimura, Y. , Madigan, M.T. , Mizoguchi, A. , Tani, K. , Wang-Otomo, Z.-Y. , Yu, L.-J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.76 Å
Structure of photosynthetic lh1-rc super-complex of rhodospirillum rubrum
Hall, M. , Humbel, B.M. , Ji, X.-C. , Kanno, R. , Kimura, Y. , Madigan, M.T. , Mizoguchi, A. , Tani, K. , Wang-Otomo, Z.-Y. , Yu, L.-J.
Primary Citation of Related Structures: 7EQD
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Reaction center protein L chain | L | 275 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | ALLSFERKYRVRGGTLIGGDLFDFWVGPFYVGFFGVTTLLFTVLGTALIVWGAALGPSWTFWQISINPPDVSYGLAMAPMAKGGLWQIITFSAIGAFVSWALREVEICRKLGIGYHIPFAFGFAILAYVSLVVIRPVMMGAWGYGFPYGFMTHLDWVSNTGYQYANFHYNPAHMLGITLFFTTCLALALHGSLILSAANPGKGEVVKGPEHENTYFQDTIGYSVGTLGIHRVGLILALSAVVWSIICMILSGPIYTGSWPDWWLWWQKLPFWNHG |
| Reaction center protein M chain | M | 305 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | SEYQNILTGVQVRTAPHSAPIAKGIFPRLGKPGFSYWLGKIGDAQIGPIYLGTTGVLSLVFGFFAIEIIGFNLLASVNWSPMEFGRQFFWLGLEPPAAEYGLGFAPLAEGGWWQIAGFFLTTSILLWWVRMYRRARALKMGTHTAWAFASAIFLFLSLGFIRPLLMGNFSESVPFGIFPHLEWTNSFSLNYGNFFYNPFHMLSIAFLYGSALLFAMHGATILAVSRLGGDREVEQITDRGTAAERAALFWRWTMGFNATMESIHRWAWWFAVLCTFTGAIGILLTGTVVDNWFEWGVKHGLAPAP |
| Photoreaction center protein H | H | 256 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | NKGDITGYMDVAQVVLYAFWIFFAGLIIYLRREDRREGYPLEDAISGKINSLQGLGSVFSIARPKIFKLKTGATYAAPNFKRDAVAIKATRTAPTAGAPFEPTGNPMTDAVGPAAYALRDELPDLTLGGQPAIVPLRVAPTFSVAAEDTDPRGLPVVDRKGAVAGKVTDLWIDRASIAIRYLEVELAATPGRKVLLPFAATRINAKTKSKTVTVQSILARHFANVPTIAKTDSITRREEDKVMAYYSSGYLYSDRV |
| Light-harvesting protein B-870 alpha chain | A | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | D | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | F | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | I | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | K | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | O | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | Q | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | S | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | U | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | W | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | Y | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | 1 | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | 3 | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | 5 | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | 7 | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 alpha chain | 9 | 62 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | MWRIWQLFDPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTSMVMPSSDLAV |
| Light-harvesting protein B-870 beta chain | B | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | E | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | G | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | J | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | N | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | P | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | R | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | T | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | V | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | X | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | Z | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | 2 | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | 4 | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | 6 | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | 8 | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
| Light-harvesting protein B-870 beta chain | 0 | 55 | Rhodospirillum Rubrum , Rhodospirillum Rubrum (Strain Atcc 11170 / Ath 1.1.1 / Dsm 467 / Lmg 4362 / Ncib 8255 / S1) | AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYS |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-05-01 Deposition Author(s): Hall, M. , Humbel, B.M. , Ji, X.-C. , Kanno, R. , Kimura, Y. , Madigan, M.T. , Mizoguchi, A. , Tani, K. , Wang-Otomo, Z.-Y. , Yu, L.-J.